RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 TMEM184BQ9Y519 407 aaPredicted RBP8.4□□□□□ -1.07
NHLRC3-202ENST00000379600 LRP12Q9Y561 859 aa8.4□□□□□ -1.07
NHLRC3-202ENST00000379600 ARID1BQ8NFD5 2236 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 LOC390937A0A1W2PQ73 354 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 TMEM200CA6NKL6 621 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 H0YIZ8 118 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 APODP05090 189 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 CTLA4P16410 223 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 MPZP25189 248 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 PRMT2P55345 433 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 FRMD1Q8N878 549 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 PAQR8Q8TEZ7 354 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 CMKLR1Q99788 373 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 MEX3AA1L020 520 aaKnown RBP8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 FAM25EA8MYX2 175 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 RAB27BO00194 218 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 PHYHO14832 338 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 EFSO43281 561 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 SPARCP09486 303 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 RFC3P40938 356 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 AKR1D1P51857 326 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 CXADRP78310 365 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 UNC119Q13432 240 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 HAGHLQ6PII5 290 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 MARCH3Q86UD3 253 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 ZNF440Q8IYI8 595 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 AVL9Q8NBF6 648 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 SLC25A44Q96H78 314 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 CCNL2Q96S94 520 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 RPP25Q9BUL9 199 aaKnown RBP8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 COMMD9Q9P000 198 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 CTSFQ9UBX1 484 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 MLXQ9UH92 298 aa8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 ZNF107Q9UII5 783 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 GDF2Q9UK05 429 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-202ENST00000379600 SPP1P10451 314 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 NFYBP25208 207 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 C1orf100Q5SVJ3 147 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 PRAMEF17Q5VTA0 474 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 RAB11FIP2Q7L804 512 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ZSCAN4Q8NAM6 433 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 SLC30A7Q8NEW0 376 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 RELTQ969Z4 430 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 DGAT2Q96PD7 388 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 CMSS1Q9BQ75 279 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 KXD1Q9BQD3 176 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 CCDC3Q9BQI4 270 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ABHD6Q9BV23 337 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 SLCO5A1Q9H2Y9 848 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 IFT22Q9H7X7 185 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 G6PC2Q9NQR9 355 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ZNF629Q9UEG4 869 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 SLC5A6Q9Y289 635 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 PHF3Q92576 2039 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 TRBV6-7A0A0A0MS04 114 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 PRSS37A4D1T9 235 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 MSGN1A6NI15 193 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 EEF1E1-BLOC1S5C9J1V9 151 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ZNF264O43296 627 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 SLC16A7O60669 478 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 UTS2O95399 124 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 HLA-DQA2P01906 255 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 CRHP06850 196 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 KCNJ3P48549 501 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 QRFPP83859 136 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ZNF117Q03924 483 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ACKR1Q16570 336 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 PRTGQ2VWP7 1150 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 CDNFQ49AH0 187 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 RAB12Q6IQ22 244 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 POMZP3Q6PJE2 187 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 RNF144BQ7Z419 303 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 TAF8Q7Z7C8 310 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 NUDCD2Q8WVJ2 157 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 UBQLN4Q9NRR5 601 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 OBP2AQ9NY56 170 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 CSAG2Q9Y5P2 127 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 TEX13DA0A0J9YY54 714 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 SSX5O60225 188 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ERCC1P07992 297 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 PRKXP51817 358 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 IL13RA1P78552 427 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 TRAPPC6BQ86SZ2 158 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ZNF584Q8IVC4 421 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 FAM219AQ8IW50 185 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 CCDC36Q8IYA8 594 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 METTL27Q8N6F8 245 aaPredicted RBP8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ELP5Q8TE02 316 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 SLC37A2Q8TED4 501 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 C2CD4CQ8TF44 421 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 CASTOR1Q8WTX7 329 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 ASB17Q8WXJ9 295 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 NKD1Q969G9 470 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 MICU1Q9BPX6 476 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 NXF5Q9H1B4 397 aaKnown RBP8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 PRTFDC1Q9NRG1 225 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 LAMA1P25391 3075 aa8.38□□□□□ -1.07
NHLRC3-202ENST00000379600 PQLC2LA1A4F0 135 aa8.37□□□□□ -1.07
NHLRC3-202ENST00000379600 F8W036 122 aa8.37□□□□□ -1.07
NHLRC3-202ENST00000379600 ZNF208O43345 1280 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms