RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ERFP50548 548 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 CCL8P80075 99 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 SPIBQ01892 262 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 COX10Q12887 443 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 RAB39AQ14964 217 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 NKPD1Q17RQ9 610 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 MICAQ29983 383 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 NRN1LQ496H8 165 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 C10orf128Q5T292 105 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 FAM205BPQ63HN1 556 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 SHISA2Q6UWI4 295 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 ZER1Q7Z7L7 766 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 AMIGO2Q86SJ2 522 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 ZNF584Q8IVC4 421 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 ICA1LQ8NDH6 482 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 NOXO1Q8NFA2 376 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 OR4C15Q8NGM1 316 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 ZNF519Q8TB69 540 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 GTF3AQ92664 365 aaKnown RBP11.17□□□□□ -0.62
CLCN6-205ENST00000376492 HDAC2Q92769 488 aaKnown RBP11.17□□□□□ -0.62
CLCN6-205ENST00000376492 FAM46AQ96IP4 442 aaKnown RBP11.17□□□□□ -0.62
CLCN6-205ENST00000376492 DUX5Q96PT3 197 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 ZNF184Q99676 751 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-205ENST00000376492 ALG12Q9BV10 488 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 SMURF2Q9HAU4 748 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 KRCC1Q9NPI7 259 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-205ENST00000376492 TMEM38BQ9NVV0 291 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 TAAR3PQ9P1P4 343 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 OPN4Q9UHM6 478 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 TMCC3Q9ULS5 477 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 SAMHD1Q9Y3Z3 626 aaKnown RBP11.17□□□□□ -0.62
CLCN6-205ENST00000376492 CACNG2Q9Y698 323 aa11.17□□□□□ -0.62
CLCN6-205ENST00000376492 PRKDCP78527 4128 aaKnown RBP11.16□□□□□ -0.62
CLCN6-205ENST00000376492 A6NIZ1 184 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 FSHBP01225 129 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 IGHV2-5P01817 119 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 ALPLP05186 524 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 CD14P08571 375 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 FAM157BP0CG42 384 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 OR8G3PP0DMU2 310 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 HKR1P10072 659 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 NR2C1P13056 603 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 PEX2P28328 305 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 RAD23AP54725 363 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 RAP1BP61224 184 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 ERVS71-1P61550 626 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 RAB1AP62820 205 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 RAP1AP62834 184 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 THEM4Q5T1C6 240 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 DCAF12L2Q5VW00 463 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 FAHD1Q6P587 224 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 CD300LDQ6UXZ3 194 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 IGFN1Q86VF2 1251 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 SKA3Q8IX90 412 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 PARP8Q8N3A8 854 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 SLC22A24Q8N4F4 322 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 PAQR4Q8N4S7 273 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-205ENST00000376492 SYT14Q8NB59 555 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 FGFBP3Q8TAT2 258 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 NANPQ8TBE9 248 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 FNDC8Q8TC99 324 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 RBP7Q96R05 134 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 GPX7Q96SL4 187 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-205ENST00000376492 GPA33Q99795 319 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 NDEL1Q9GZM8 345 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 SEMA6AQ9H2E6 1030 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 OR51B6Q9H340 312 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 HINT3Q9NQE9 182 aaKnown RBP11.16□□□□□ -0.62
CLCN6-205ENST00000376492 RAB26Q9ULW5 256 aa11.16□□□□□ -0.62
CLCN6-205ENST00000376492 UNC119BA6NIH7 251 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 C17orf100A8MU93 164 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 H0YAE9 185 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 J3QLI3 93 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 AHCYL1O43865 530 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 NDUFB2O95178 105 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 CCL2P13500 99 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 RPL4P36578 427 aaKnown RBP11.15□□□□□ -0.62
CLCN6-205ENST00000376492 ZNF84P51523 738 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 ERVK-25P63136 954 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 TOP3AQ13472 1001 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-205ENST00000376492 MIDNQ504T8 468 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 KDM4DQ6B0I6 523 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 RGS7BPQ6MZT1 257 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-205ENST00000376492 C1orf94Q6P1W5 598 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 SLC25A47Q6Q0C1 308 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 FAM122BQ7Z309 247 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 DPPA2Q7Z7J5 298 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 CBR4Q8N4T8 237 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 SIGLECL1Q8N7X8 197 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 GIPC3Q8TF64 312 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 DVL3Q92997 716 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-205ENST00000376492 RAB39BQ96DA2 213 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 CIB1Q99828 191 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 DGCR6LQ9BY27 220 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 Q9H521 79 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 C7orf69Q9H7B7 122 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 NRIP3Q9NQ35 241 aa11.15□□□□□ -0.62
CLCN6-205ENST00000376492 DDX28Q9NUL7 540 aaKnown RBP11.15□□□□□ -0.62
CLCN6-205ENST00000376492 GRHPRQ9UBQ7 328 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms