RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 ZNF774Q6NX45 483 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 ZNF627Q7L945 461 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 BHLHA15Q7RTS1 189 aaPredicted RBP12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 RNF133Q8WVZ7 376 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 MGLLQ99685 303 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 MROQ9BYG7 248 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 PLEK2Q9NYT0 353 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 ZNF224Q9NZL3 707 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 LRP12Q9Y561 859 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 TIMM10BQ9Y5J6 103 aa12.93□□□□□ -0.34
CHRDL2-202ENST00000376324 FAM90A27PA6NNH2 459 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 SGCEO43556 437 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 DOK2O60496 412 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 IL32P24001 234 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 ALDH3B2P48448 385 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 GBX2P52951 348 aaPredicted RBP12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 UBE2NP61088 152 aaKnown RBP12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 PSG4Q00888 419 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 SCRN3Q0VDG4 424 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 RAB39AQ14964 217 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 P2RY6Q15077 328 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 TSTQ16762 297 aaKnown RBP12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 ARMCX4Q5H9R4 360 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 SFRP5Q5T4F7 317 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 ZNF684Q5T5D7 378 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 VASH1Q7L8A9 365 aaPredicted RBP12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 MRGPRGQ86SM5 289 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 SATL1Q86VE3 508 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 ZNF679Q8IYX0 411 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 SYS1Q8N2H4 156 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 ZNF485Q8NCK3 441 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 PELI1Q96FA3 418 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 CCDC120Q96HB5 630 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 MYCBPQ99417 103 aaPredicted RBP12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 OR2H1Q9GZK4 316 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 BABAM2Q9NXR7 383 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 COQ3Q9NZJ6 369 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 FBXL3Q9UKT7 428 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 HIVEP3Q5T1R4 2406 aa12.92□□□□□ -0.34
CHRDL2-202ENST00000376324 A0A1B0GUH1 482 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 ZNF878C9JN71 531 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 ABHD16AO95870 558 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 TACSTD2P09758 323 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 HOXC12P31275 282 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 OPRL1P41146 370 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 PRKXP51817 358 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 RIDAP52758 137 aaKnown RBP12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 HIST1H3AP68431 136 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 ROM1Q03395 351 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 FAM27E3Q08E93 113 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 PABPC1L2AQ5JQF8 200 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 ELFN2Q5R3F8 820 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 HIST2H3PS2Q5TEC6 136 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 LIPNQ5VXI9 398 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 ALKBH2Q6NS38 261 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 HIST2H3AQ71DI3 136 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 SLC7A6Q92536 515 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 COG8Q96MW5 612 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 OPALINQ96PE5 141 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 WNT5BQ9H1J7 359 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 NOX3Q9HBY0 568 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 PNRC2Q9NPJ4 139 aaKnown RBP12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 GTF2A1LQ9UNN4 478 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 N6AMT1Q9Y5N5 214 aa12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 KMT2BQ9UMN6 2715 aaPredicted RBP12.91□□□□□ -0.34
CHRDL2-202ENST00000376324 PRR14LQ5THK1 2151 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 SULT1C4O75897 302 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 HSD11B1P28845 292 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 CHRNB4P30926 498 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 HTR5AP47898 357 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 RAB1AP62820 205 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 GALK2Q01415 458 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 RAB35Q15286 201 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 SYT6Q5T7P8 510 aaPredicted RBP12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 TMEM53Q6P2H8 277 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 STAC2Q6ZMT1 411 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 GPR141Q7Z602 305 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 SYT9Q86SS6 491 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 MDP1Q86V88 176 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 NANOS1Q8WY41 292 aaKnown RBP12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 ATF6BQ99941 703 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 C1QTNF6Q9BXI9 259 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 BRD7Q9NPI1 651 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 TRIM36Q9NQ86 728 aa12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 ERRFI1Q9UJM3 462 aaPredicted RBP12.9□□□□□ -0.34
CHRDL2-202ENST00000376324 AGFG2O95081 481 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 UBL3O95164 117 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 LIPAP38571 399 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 MLLT11Q13015 90 aaPredicted RBP12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 GSG1Q2KHT4 349 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 LIPKQ5VXJ0 399 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 ARL9Q6T311 187 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 KCTD20Q7Z5Y7 419 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 C1orf162Q8NEQ5 155 aaPredicted RBP12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 OR1F12Q8NHA8 337 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 HSD17B8Q92506 261 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 S100PBPQ96BU1 408 aa12.89□□□□□ -0.35
CHRDL2-202ENST00000376324 SLC17A5Q9NRA2 495 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms