RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SIRT3Q9NTG7 399 aaPredicted RBP12.35□□□□□ -0.43
C9orf47-203ENST00000375851 HDGFL3Q9Y3E1 203 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 UNC13CQ8NB66 2214 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 HRO43593 1189 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 TNFSF15O95150 251 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 OMGP23515 440 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 OR11L1Q8NGX0 322 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 OR10K1Q8NGX5 313 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 PCNPQ8WW12 178 aaKnown RBP12.35□□□□□ -0.43
C9orf47-203ENST00000375851 ZCCHC4Q9H5U6 513 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 SLCO1C1Q9NYB5 712 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 A0A0B4J2A0 478 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 FADS1O60427 444 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 SCGB2A1O75556 95 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 RFC3P40938 356 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 TBC1D28Q2M2D7 210 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 IAH1Q2TAA2 248 aaPredicted RBP12.35□□□□□ -0.43
C9orf47-203ENST00000375851 STAC2Q6ZMT1 411 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 CMTM4Q8IZR5 234 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 C3orf49Q96BT1 292 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 ATF6BQ99941 703 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 SCPEP1Q9HB40 452 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 SHPKQ9UHJ6 478 aa12.35□□□□□ -0.43
C9orf47-203ENST00000375851 CBR3O75828 277 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 ANXA7P20073 488 aaKnown RBP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 RAB6AP20340 208 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 CDK5Q00535 292 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 CLN3Q13286 438 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 ZIC1Q15915 447 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 MDGA2Q7Z553 956 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 LILRB4Q8NHJ6 448 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 SLAMF9Q96A28 289 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 SDSLQ96GA7 329 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 MMP25Q9NPA2 562 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 IGHV3-15A0A0B4J1V0 119 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 HSPB2A8KAH6 182 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 RNF212BA8MTL3 300 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 MSTNO14793 375 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 DHHO43323 396 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 C21orf58P58505 322 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 RPP30P78346 268 aaKnown RBP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 IL10RAQ13651 578 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 HSPB2Q16082 182 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 PCK2Q16822 640 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 BATF2Q8N1L9 274 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 FYTTD1Q96QD9 318 aaKnown RBP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 NKX3-1Q99801 234 aaPredicted RBP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 JAM3Q9BX67 310 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 R4GMQ9 66 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 ZDBF2Q9HCK1 2354 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 ZNF136P52737 540 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 CLDN15P56746 228 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 PLA2G7Q13093 441 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 TMEM9BQ9NQ34 198 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 LUZP4Q9P127 313 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 KIF25Q9UIL4 384 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 NUPL2O15504 423 aaKnown RBP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 GRPP07492 148 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 KIR2DL1P43626 348 aaPredicted RBP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 NXPH1P58417 271 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 XAF1Q6GPH4 301 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 OR10K2Q6IF99 312 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 FAM199XQ6PEV8 388 aaPredicted RBP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.34□□□□□ -0.43
C9orf47-203ENST00000375851 B3GAT1Q9P2W7 334 aa12.34□□□□□ -0.43
C9orf47-203ENST00000375851 ANKUB1A6NFN9 424 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 PHF1O43189 567 aaPredicted RBP12.33□□□□□ -0.44
C9orf47-203ENST00000375851 CD79BP40259 229 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 C2orf76Q3KRA6 126 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 MRPL41Q8IXM3 137 aaKnown RBP12.33□□□□□ -0.44
C9orf47-203ENST00000375851 MED18Q9BUE0 208 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 EDEM2Q9BV94 578 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 C1QTNF6Q9BXI9 259 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
C9orf47-203ENST00000375851 QSER1Q2KHR3 1735 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 A0A087WZY1 265 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 EIF4EP06730 217 aaKnown RBP12.33□□□□□ -0.44
C9orf47-203ENST00000375851 DUSP2Q05923 314 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 PHLDA2Q53GA4 152 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 CRLF2Q9HC73 371 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 PRMT8Q9NR22 394 aaPredicted RBP12.33□□□□□ -0.44
C9orf47-203ENST00000375851 CSF3P09919 207 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 DDOSTP39656 456 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 LUMP51884 338 aaPredicted RBP12.33□□□□□ -0.44
C9orf47-203ENST00000375851 SRPXP78539 464 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 SHBQ15464 509 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 PAN3Q58A45 887 aaKnown RBP12.33□□□□□ -0.44
C9orf47-203ENST00000375851 ABI3BPQ7Z7G0 1075 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 OR52H1Q8NGJ2 320 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 AKIP1Q9NQ31 210 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 TAF1LQ8IZX4 1826 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 LRRC37AA6NMS7 1700 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 SVILO95425 2214 aa12.33□□□□□ -0.44
C9orf47-203ENST00000375851 A0A096LPE4 126 aa12.32□□□□□ -0.44
C9orf47-203ENST00000375851 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
C9orf47-203ENST00000375851 MED6O75586 246 aa12.32□□□□□ -0.44
C9orf47-203ENST00000375851 TRAPPC2P0DI81 140 aa12.32□□□□□ -0.44
C9orf47-203ENST00000375851 TRAPPC2BP0DI82 140 aa12.32□□□□□ -0.44
C9orf47-203ENST00000375851 S100A11P31949 105 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms