RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RSBN1Q5VWQ0 802 aaPredicted RBP17.36■□□□□ 0.37
HDAC1-201ENST00000373548 TMEM123Q8N131 208 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 ZIC4Q8N9L1 334 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 OR13C3Q8NGS6 347 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 OR2AJ1Q8NGZ0 328 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 SMIM4Q8WVI0 70 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 RAB40AQ8WXH6 277 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 TAS2R4Q9NYW5 299 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 RABL2AQ9UBK7 228 aaPredicted RBP17.36■□□□□ 0.37
HDAC1-201ENST00000373548 ASH2LQ9UBL3 628 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 RABL2BQ9UNT1 228 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 FOXJ3Q9UPW0 622 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 OTOGLQ3ZCN5 2332 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 NCOA6Q14686 2063 aaPredicted RBP17.35■□□□□ 0.37
HDAC1-201ENST00000373548 TTLL8A6PVC2 850 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 STMND1H3BQB6 276 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 P2RY10O00398 339 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 DNPH1O43598 174 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 UBCP0CG48 685 aaKnown RBP17.35■□□□□ 0.37
HDAC1-201ENST00000373548 DDOSTP39656 456 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 ART1P52961 327 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 RAC3P60763 192 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 ABHD17BQ5VST6 288 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 TMEM244Q5VVB8 128 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 KLHL24Q6TFL4 600 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 KRT74Q7RTS7 529 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 OR6N1Q8NGY5 312 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 UPRTQ96BW1 309 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 HAVCR1Q96D42 359 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 SFXN2Q96NB2 322 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 FAM117AQ9C073 453 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 AUNIPQ9H7T9 357 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 ZFP64Q9NPA5 681 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 MRPS18CQ9Y3D5 142 aaKnown RBP17.35■□□□□ 0.37
HDAC1-201ENST00000373548 CACNG2Q9Y698 323 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 MED13Q9UHV7 2174 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 ZNF878C9JN71 531 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 LMX1BO60663 402 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 TRAPPC6AO75865 159 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 NEURL1O76050 574 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 TTRP02766 147 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 ITGA5P08648 1049 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 NR2C1P13056 603 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 SLC6A1P30531 599 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 SCAND1P57086 179 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 PLA2G7Q13093 441 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 CSRP2Q16527 193 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 MTFR2Q6P444 385 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 GLRX5Q86SX6 157 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 S100A16Q96FQ6 103 aaKnown RBP17.35■□□□□ 0.37
HDAC1-201ENST00000373548 OR2B2Q9GZK3 357 aa17.35■□□□□ 0.37
HDAC1-201ENST00000373548 WDPCPO95876 746 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 ACSM4P0C7M7 580 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 GDF1P27539 372 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 BTCP35070 178 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 PTH2RP49190 550 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 ZNF133P52736 654 aaPredicted RBP17.34■□□□□ 0.37
HDAC1-201ENST00000373548 GABREP78334 506 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 C10orf128Q5T292 105 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 LINGO2Q7L985 606 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 ELMOD2Q8IZ81 293 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 SIGLEC12Q96PQ1 595 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 MARVELD1Q9BSK0 173 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 PBOV1Q9GZY1 135 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 PNRC2Q9NPJ4 139 aaKnown RBP17.34■□□□□ 0.37
HDAC1-201ENST00000373548 DDX28Q9NUL7 540 aaKnown RBP17.34■□□□□ 0.37
HDAC1-201ENST00000373548 CKLFQ9UBR5 152 aa17.34■□□□□ 0.37
HDAC1-201ENST00000373548 SLC17A2O00624 439 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 RER1O15258 196 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 CCNKO75909 580 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 CDK2P24941 298 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 ITGA3P26006 1051 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 STARP49675 285 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 SELENOPP49908 381 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 PLA1AQ53H76 456 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 FAM166AQ6J272 317 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 RHOUQ7L0Q8 258 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 SIAH3Q8IW03 269 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 TOMM5Q8N4H5 51 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 PLPP7Q8NBV4 271 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 OR51D1Q8NGF3 324 aa17.33■□□□□ 0.37
HDAC1-201ENST00000373548 GCDHQ92947 438 aaPredicted RBP17.33■□□□□ 0.37
HDAC1-201ENST00000373548 TMIGD3P0DMS9 266 aaPredicted RBP17.33■□□□□ 0.36
HDAC1-201ENST00000373548 SUCLG1P53597 346 aaKnown RBP17.33■□□□□ 0.36
HDAC1-201ENST00000373548 CARD18P57730 90 aa17.33■□□□□ 0.36
HDAC1-201ENST00000373548 PSMA6P60900 246 aaKnown RBP17.33■□□□□ 0.36
HDAC1-201ENST00000373548 OR51A2Q8NGJ7 313 aa17.33■□□□□ 0.36
HDAC1-201ENST00000373548 OR6F1Q8NGZ6 308 aa17.33■□□□□ 0.36
HDAC1-201ENST00000373548 NKD1Q969G9 470 aa17.33■□□□□ 0.36
HDAC1-201ENST00000373548 ADGRG7Q96K78 797 aa17.33■□□□□ 0.36
HDAC1-201ENST00000373548 NKX3-1Q99801 234 aaPredicted RBP17.33■□□□□ 0.36
HDAC1-201ENST00000373548 SF3B5Q9BWJ5 86 aaKnown RBP17.33■□□□□ 0.36
HDAC1-201ENST00000373548 FOXD3Q9UJU5 478 aaPredicted RBP17.33■□□□□ 0.36
HDAC1-201ENST00000373548 BOKQ9UMX3 212 aaPredicted RBP17.33■□□□□ 0.36
HDAC1-201ENST00000373548 CASRP41180 1078 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 RAB11BQ15907 218 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 SGCAQ16586 387 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 TATDN3Q17R31 274 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 TMEM69Q5SWH9 247 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 FOXL2NBQ6ZUU3 175 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms