RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 OR9A4Q8NGU2 314 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 RNASEH2CQ8TDP1 164 aaKnown RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 CD300LFQ8TDQ1 290 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 CASTOR1Q8WTX7 329 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 FBXO32Q969P5 355 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 SRMSQ9H3Y6 488 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 PRG3Q9Y2Y8 225 aaPredicted RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 EFSO43281 561 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 IL33O95760 270 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 SLC35G4P0C7Q5 338 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 THBS4P35443 961 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 PBX2P40425 430 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 EIF5AP63241 154 aaKnown RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 GABREP78334 506 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 RASGEF1BQ0VAM2 473 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 EBPQ15125 230 aaKnown RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 RAB35Q15286 201 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 ELOCQ15369 112 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 MIDNQ504T8 468 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 SLC25A36Q96CQ1 311 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 Q96M85 177 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 STACQ99469 402 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 TRAV27A0A087WT01 109 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 M0R143 59 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 FCMRO60667 390 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 KLKB1P03952 638 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 BSGP35613 385 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 SOX2P48431 317 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 SCAND1P57086 179 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 FAM46CQ5VWP2 391 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 KHDRBS2Q5VWX1 349 aaKnown RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 OR4C11Q6IEV9 310 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 UBE3DQ7Z6J8 389 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 FOXRED2Q8IWF2 684 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 SLC35F2Q8IXU6 374 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF248Q8NDW4 579 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 OR4S1Q8NGB4 309 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 OR51F2Q8NH61 342 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 SVIPQ8NHG7 77 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 DTD2Q96FN9 168 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 EFCAB11Q9BUY7 163 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 PCYT1BQ9Y5K3 369 aaPredicted RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 TICRRQ7Z2Z1 1910 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 LEFTY2O00292 366 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 CSN2P05814 226 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 ERCC1P07992 297 aaPredicted RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 LMO1P25800 156 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 Q499Y3 187 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM240Q5SV17 173 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 C9orf64Q5T6V5 341 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 PRSS54Q6PEW0 395 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM220Q6QAJ8 160 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 SPRED2Q7Z698 418 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF558Q96NG5 402 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 A0A087WZY1 265 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 OR2AG2A6NM03 316 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 RIIAD1A6NNX1 92 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 TMPRSS11DO60235 418 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 DUS4LO95620 317 aaKnown RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 CSTBP04080 98 aaKnown RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 CKMP06732 381 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 OR13C7P0DN81 318 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 HOXC8P31273 242 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 GLO1Q04760 184 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 MLC1Q15049 377 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 ABLIM2Q6H8Q1 611 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.6□□□□□ -1.033e-6■■■□□ 16.5
SF3A3-201ENST00000373019 CPEB3Q8NE35 698 aaKnown RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 GAL3ST4Q96RP7 486 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 NKX3-1Q99801 234 aaPredicted RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 SLC35B3Q9H1N7 401 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 CD84Q9UIB8 345 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 INSL6Q9Y581 213 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 MTCH2Q9Y6C9 303 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 URGCP-MRPS24S4R325 110 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 GON4LQ3T8J9 2241 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 VWA8A3KMH1 1905 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 DOK2O60496 412 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 TSPAN15O95858 294 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 SPARCP09486 303 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 METTL15P1P0C7V9 234 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 KHKP50053 298 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF136P52737 540 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 TSTA3Q13630 321 aaPredicted RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 EIF2B1Q14232 305 aaKnown RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 C2orf76Q3KRA6 126 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF684Q5T5D7 378 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 AMER3Q8N944 861 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 FAM174AQ8TBP5 190 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 NPRL2Q8WTW4 380 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 ADGRG7Q96K78 797 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 CNN2Q99439 309 aaKnown RBP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 Q9N2J8 555 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 KLK13Q9UKR3 277 aa8.6□□□□□ -1.03
SF3A3-201ENST00000373019 PUS1Q9Y606 427 aaKnown RBP eCLIP8.6□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF736B4DX44 427 aaPredicted RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 P2RX6O15547 441 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 CYB5BO43169 146 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms