RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 OR13C5Q8NGS8 318 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 MBD3L2Q8NHZ7 208 aaPredicted RBP20.98■□□□□ 0.95
SNX3-203ENST00000368979 FAM57AQ8TBR7 257 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 SNRNP40Q96DI7 357 aaKnown RBP20.98■□□□□ 0.95
SNX3-203ENST00000368979 KCTD7Q96MP8 289 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 TSC22D3Q99576 134 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 KCNN2Q9H2S1 579 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 DDX28Q9NUL7 540 aaKnown RBP20.98■□□□□ 0.95
SNX3-203ENST00000368979 ZNF281Q9Y2X9 895 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 DVL2O14641 736 aa20.97■□□□□ 0.95
SNX3-203ENST00000368979 FBXW9Q5XUX1 488 aa20.97■□□□□ 0.95
SNX3-203ENST00000368979 RTL6Q6ICC9 239 aa20.97■□□□□ 0.95
SNX3-203ENST00000368979 ZNF813Q6ZN06 617 aa20.97■□□□□ 0.95
SNX3-203ENST00000368979 CD163Q86VB7 1156 aa20.97■□□□□ 0.95
SNX3-203ENST00000368979 CATSPERDQ86XM0 798 aa20.97■□□□□ 0.95
SNX3-203ENST00000368979 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.97■□□□□ 0.95
SNX3-203ENST00000368979 RGP1Q92546 391 aaPredicted RBP20.97■□□□□ 0.95
SNX3-203ENST00000368979 SH3GL3Q99963 347 aa20.97■□□□□ 0.95
SNX3-203ENST00000368979 EMC9Q9Y3B6 208 aa20.97■□□□□ 0.95
SNX3-203ENST00000368979 PHF3Q92576 2039 aaKnown RBP20.97■□□□□ 0.95
SNX3-203ENST00000368979 FIGNL2A6NMB9 653 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 TMEM212A6NML5 194 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 SERPINA3P01011 423 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 FOXG1P55316 489 aaPredicted RBP20.96■□□□□ 0.95
SNX3-203ENST00000368979 ARF1P84077 181 aaKnown RBP20.96■□□□□ 0.95
SNX3-203ENST00000368979 FAPQ12884 760 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 CCDC92Q53HC0 331 aaPredicted RBP20.96■□□□□ 0.95
SNX3-203ENST00000368979 YIF1BQ5BJH7 314 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 KLHL24Q6TFL4 600 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 SEM1Q6ZVN7 128 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 ABHD12BQ7Z5M8 362 aaPredicted RBP20.96■□□□□ 0.95
SNX3-203ENST00000368979 UBE2J2Q8N2K1 259 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 IL17RDQ8NFM7 739 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 OR5AK2Q8NH90 309 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 NIPAL2Q9H841 368 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 GALNT8Q9NY28 637 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 FAM215AQ9Y5M1 114 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 CHD8Q9HCK8 2581 aa20.96■□□□□ 0.95
SNX3-203ENST00000368979 ARHGAP21Q5T5U3 1957 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 KIR2DL2P43627 348 aaPredicted RBP20.95■□□□□ 0.94
SNX3-203ENST00000368979 MMP16P51512 607 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 LSAMPQ13449 338 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 ZNF829Q3KNS6 432 aaPredicted RBP20.95■□□□□ 0.94
SNX3-203ENST00000368979 ACSM3Q53FZ2 586 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 PRR30Q53SZ7 412 aaPredicted RBP20.95■□□□□ 0.94
SNX3-203ENST00000368979 C1orf185Q5T7R7 199 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 ZNF544Q6NX49 715 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 TFAP2EQ6VUC0 442 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 SYT9Q86SS6 491 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 WACQ9BTA9 647 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 G6PC2Q9NQR9 355 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 FAM206AQ9NX38 181 aa20.95■□□□□ 0.94
SNX3-203ENST00000368979 SPENQ96T58 3664 aaKnown RBP20.95■□□□□ 0.94
SNX3-203ENST00000368979 LOC110117498-PIK3R3F6TDL0 507 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 GRB2P62993 217 aaKnown RBP20.94■□□□□ 0.94
SNX3-203ENST00000368979 DGUOKQ16854 277 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 SKA3Q8IX90 412 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 OR6K3Q8NGY3 331 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 DACH2Q96NX9 599 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 MED18Q9BUE0 208 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 COMMD4Q9H0A8 199 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 SLC25A18Q9H1K4 315 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 ASF1BQ9NVP2 202 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 CCDC59Q9P031 241 aaKnown RBP20.94■□□□□ 0.94
SNX3-203ENST00000368979 MAP1BP46821 2468 aaKnown RBP20.94■□□□□ 0.94
SNX3-203ENST00000368979 MED12LQ86YW9 2145 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 TMEM269A0A1B0GVZ9 245 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 FARS2O95363 451 aaKnown RBP20.94■□□□□ 0.94
SNX3-203ENST00000368979 IL1AP01583 271 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 ABOP16442 354 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 CTSSP25774 331 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 PSMA6P60900 246 aaKnown RBP20.94■□□□□ 0.94
SNX3-203ENST00000368979 SCRN3Q0VDG4 424 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 KLRB1Q12918 225 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 ELFN2Q5R3F8 820 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 C9orf135Q5VTT2 229 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 UNQ9370/PRO34162Q6UXP9 181 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 SLC16A14Q7RTX9 510 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 CEACAM19Q7Z692 300 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 ATF6BQ99941 703 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 SLIRPQ9GZT3 109 aaKnown RBP20.94■□□□□ 0.94
SNX3-203ENST00000368979 SLC22A13Q9Y226 551 aa20.94■□□□□ 0.94
SNX3-203ENST00000368979 GATBO75879 557 aaKnown RBP20.93■□□□□ 0.94
SNX3-203ENST00000368979 HOXD4P09016 255 aaPredicted RBP20.93■□□□□ 0.94
SNX3-203ENST00000368979 ZNF32P17041 273 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 HSD11B1P28845 292 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 MPGP29372 298 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 RPS19P39019 145 aaKnown RBP20.93■□□□□ 0.94
SNX3-203ENST00000368979 SH3BGRP55822 239 aaPredicted RBP20.93■□□□□ 0.94
SNX3-203ENST00000368979 RAB35Q15286 201 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 TAF13Q15543 124 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 ZMAT1Q5H9K5 638 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 ZNF676Q8N7Q3 588 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 PPIL3Q9H2H8 161 aaKnown RBP20.93■□□□□ 0.94
SNX3-203ENST00000368979 OR52A1Q9UKL2 312 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 SLC5A6Q9Y289 635 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 PMF1-BGLAPU3KQ54 211 aa20.93■□□□□ 0.94
SNX3-203ENST00000368979 TRBV5-5A0A0J9YX44 114 aa20.92■□□□□ 0.94
SNX3-203ENST00000368979 SHISA3A0PJX4 238 aa20.92■□□□□ 0.94
SNX3-203ENST00000368979 TOXO94900 526 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms