RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SFTPDP35247 375 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 CRYBB2P43320 205 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 CLDN20P56880 219 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 DYNC1I2Q13409 638 aaKnown RBP7.75□□□□□ -1.17
SNX27-201ENST00000368838 RNPS1Q15287 305 aaKnown RBP7.75□□□□□ -1.17
SNX27-201ENST00000368838 WIPI1Q5MNZ9 446 aaPredicted RBP7.75□□□□□ -1.17
SNX27-201ENST00000368838 C1QTNF12Q5T7M4 302 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 HBMQ6B0K9 141 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 KCTD18Q6PI47 426 aaPredicted RBP7.75□□□□□ -1.17
SNX27-201ENST00000368838 PAMR1Q6UXH9 720 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 SPNS3Q6ZMD2 512 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 USP43Q70EL4 1123 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 YRDCQ86U90 279 aaKnown RBP7.75□□□□□ -1.17
SNX27-201ENST00000368838 LHFPL3Q86UP9 236 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 GLB1L2Q8IW92 636 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 PM20D2Q8IYS1 436 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 OR9K2Q8NGE7 335 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 OR10D3Q8NH80 312 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 RNF128Q8TEB7 428 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 ZNRF4Q8WWF5 429 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 ZMYND19Q96E35 227 aaPredicted RBP7.75□□□□□ -1.17
SNX27-201ENST00000368838 BOD1Q96IK1 185 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 NXF2Q9GZY0 626 aaKnown RBP7.75□□□□□ -1.17
SNX27-201ENST00000368838 NIPAL2Q9H841 368 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 GLRX2Q9NS18 164 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 PARPBPQ9NWS1 579 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 MRPL22Q9NWU5 206 aaKnown RBP7.75□□□□□ -1.17
SNX27-201ENST00000368838 FLVCR1Q9Y5Y0 555 aa7.75□□□□□ -1.17
SNX27-201ENST00000368838 A0A075B6Q4 140 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 ZNF726A6NNF4 738 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SHISA8B8ZZ34 492 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SLC16A7O60669 478 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 TRAPPC6AO75865 159 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 GATBO75879 557 aaKnown RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 CNOT4O95628 575 aaKnown RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 SERPINA3P01011 423 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 GHRHP01286 108 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 IL1AP01583 271 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 FCGR2AP12318 317 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 NPR2P20594 1047 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 CFL1P23528 166 aaKnown RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 LAP3P28838 519 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 ENTPD1P49961 510 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 GBX2P52951 348 aaPredicted RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 BIDP55957 195 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 HIST1H3AP68431 136 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SIRPAP78324 504 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 MRPS34P82930 218 aaKnown RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 RUNX1T1Q06455 604 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 AQP6Q13520 282 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 DOC2BQ14184 412 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SF3B4Q15427 424 aaKnown RBP eCLIP7.74□□□□□ -1.17
SNX27-201ENST00000368838 TSTQ16762 297 aaKnown RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 HIST2H3PS2Q5TEC6 136 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 OR2G6Q5TZ20 316 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SLC18B1Q6NT16 456 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 HIST2H3AQ71DI3 136 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SYT9Q86SS6 491 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 C20orf196Q8IYI0 205 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 ZNF679Q8IYX0 411 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 RELL2Q8NC24 303 aaPredicted RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 NAXEQ8NCW5 288 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 OR10H4Q8NGA5 316 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 DYNC2LI1Q8TCX1 351 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SPRYD4Q8WW59 207 aaPredicted RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 ABTB1Q969K4 478 aaPredicted RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 SARAFQ96BY9 339 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SMIM19Q96E16 107 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 PELI1Q96FA3 418 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 TXNDC15Q96J42 360 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 OR2M2Q96R28 347 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 OR8B4Q96RC9 309 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 TSC22D3Q99576 134 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 SRXN1Q9BYN0 137 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 NAA50Q9GZZ1 169 aaKnown RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 KCNN2Q9H2S1 579 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 TAS2R16Q9NYV7 291 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 GLTPQ9NZD2 209 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 CCDC59Q9P031 241 aaKnown RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 EMC3Q9P0I2 261 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 CYB5R1Q9UHQ9 305 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 ST6GALNAC2Q9UJ37 374 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 ING1Q9UK53 422 aaPredicted RBP7.74□□□□□ -1.17
SNX27-201ENST00000368838 SSR3Q9UNL2 185 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 GSTK1Q9Y2Q3 226 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 VPS13CQ709C8 3753 aa7.74□□□□□ -1.17
SNX27-201ENST00000368838 NIPBLQ6KC79 2804 aaeCLIP7.73□□□□□ -1.17
SNX27-201ENST00000368838 CCDC160A6NGH7 325 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 METTL15A6NJ78 407 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 ACOD1A6NK06 481 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 TNFSF11O14788 317 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 ST8SIA5O15466 376 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 WDR1O75083 606 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 UPK3AO75631 287 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 GPX5O75715 221 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 LALBAP00709 142 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 RAF1P04049 648 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 KRT8P05787 483 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 GYPBP06028 91 aa7.73□□□□□ -1.17
SNX27-201ENST00000368838 BMP5P22003 454 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms