RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FBXL2Q9UKC9 423 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 SLC22A13Q9Y226 551 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 EMC9Q9Y3B6 208 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 HS3ST3B1Q9Y662 390 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 A0A0A6YYJ9 748 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 GJE1A6NN92 205 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 A8MV72 311 aaPredicted RBP12.49□□□□□ -0.41
USF1-202ENST00000368020 PEX14O75381 377 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 ADRB1P08588 477 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 PGA4P0DJD7 388 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 PGA3P0DJD8 388 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
USF1-202ENST00000368020 FMODQ06828 376 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 MFGE8Q08431 387 aaPredicted RBP12.49□□□□□ -0.41
USF1-202ENST00000368020 TNK1Q13470 666 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 ODF4Q2M2E3 257 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 TMEM164Q5U3C3 297 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 FAM166AQ6J272 317 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 ASCC1Q8N9N2 400 aaKnown RBP12.49□□□□□ -0.41
USF1-202ENST00000368020 OR2AJ1Q8NGZ0 328 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 PTX4Q96A99 478 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 FAM3DQ96BQ1 224 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 SGCZQ96LD1 299 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 HYLS1Q96M11 299 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 FOXN4Q96NZ1 517 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 EMC7Q9NPA0 242 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 PTPRBP23467 1997 aa12.49□□□□□ -0.41
USF1-202ENST00000368020 TRAV6A0A075B6T7 132 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 A0A087WV48 116 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 A0A1B0GVI7 797 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 LOC107986453A0A1B0GWG9 222 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 GGT3PA6NGU5 568 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 ZNF726A6NNF4 738 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 SULT2B1O00204 365 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 SULT1C2O00338 296 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 TRAF3IP2O43734 574 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 CSF1P09603 554 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 PSMB1P20618 241 aaKnown RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 POU3F4P49335 361 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 GZMKP49863 264 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 P2RY4P51582 365 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 CLDN6P56747 220 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 CSNK2A1P68400 391 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 FAPQ12884 760 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 KCNMB1Q16558 191 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 RNASE12Q5GAN4 147 aaKnown RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 LRFN4Q6PJG9 635 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 TMPPEQ6ZT21 453 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 PRSS45Q7RTY3 260 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 RPS19BP1Q86WX3 136 aaKnown RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 IZUMO1Q8IYV9 350 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 TMEM156Q8N614 296 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 OR11G2Q8NGC1 345 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 GRPEL2Q8TAA5 225 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 SLAMF6Q96DU3 332 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 GON7Q9BXV9 100 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 C20orf85Q9H1P6 137 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 OR51J1Q9H342 316 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 AKIRIN1Q9H9L7 192 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 HRASLSQ9HDD0 168 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 G6PC2Q9NQR9 355 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 HPF1Q9NWY4 346 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 ING4Q9UNL4 249 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 RCE1Q9Y256 329 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 SPTBN2O15020 2390 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 ZNF878C9JN71 531 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 DNPH1O43598 174 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 CTAG2O75638 210 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 RBBP9O75884 186 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 MPZL1O95297 269 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 TGM6O95932 706 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 MT-ND4P03905 459 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 ITGA5P08648 1049 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 ANXA3P12429 323 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 HTR2CP28335 458 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 MLF1P58340 268 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 RIPPLY1Q0D2K3 151 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 RSPO4Q2I0M5 234 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 GSG1Q2KHT4 349 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 TMEM176BQ3YBM2 270 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 METTL11BQ5VVY1 283 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 TMPRSS7Q7RTY8 843 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 LUZP2Q86TE4 346 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 DNAAF1Q8NEP3 725 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 OR1J4Q8NGS1 313 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 ZFAND1Q8TCF1 268 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 C11orf40Q8WZ69 217 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 NTNG2Q96CW9 530 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 TMEM41AQ96HV5 264 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 RANBP3Q9H6Z4 567 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 PAQR5Q9NXK6 330 aaPredicted RBP12.48□□□□□ -0.41
USF1-202ENST00000368020 POLR1DQ9Y2S0 133 aa12.48□□□□□ -0.41
USF1-202ENST00000368020 A0A1W2PNU3 283 aaPredicted RBP12.47□□□□□ -0.41
USF1-202ENST00000368020 A0A1W2PPL8 197 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 LOC390937A0A1W2PQ73 354 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 SHISA8B8ZZ34 492 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 H7C417 338 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 CBR3O75828 277 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms