RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 POPDC3Q9HBV1 291 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 BCL9O00512 1426 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 PLXND1Q9Y4D7 1925 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 GLCEO94923 617 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 PDGFBP01127 241 aaPredicted RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 CD82P27701 267 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 COX20Q5RI15 118 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 PCDH15Q96QU1 1955 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 CXCL3P19876 107 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ZNF468Q5VIY5 522 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 SMIM12Q96EX1 92 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 STARD5Q9NSY2 213 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 FCGR2CP31995 323 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 PSMB3P49720 205 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ASCL1P50553 236 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 SLC17A1Q14916 467 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 GPR137Q96N19 417 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 CPEB1Q9BZB8 566 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 LGALSLQ3ZCW2 172 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 PTRH1Q86Y79 214 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 H7C1C5 153 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 LCN6P62502 163 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 EDDM3AQ14507 147 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 FAM110CQ1W6H9 321 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 RTP4Q96DX8 246 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 NKX3-1Q99801 234 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 OR8G3PP0DMU2 310 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 RFX2P48378 723 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 MS4A13Q5J8X5 152 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ZNF707Q96C28 371 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 BOCQ9BWV1 1114 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 GABARAPL3Q9BY60 117 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 UCK1Q9HA47 277 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 HHATLQ9HCP6 504 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ADAM29Q9UKF5 820 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ACACAQ13085 2346 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 HBE1P02100 147 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 HTR2CP28335 458 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ERVFRD-1P60508 538 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 RAC1P63000 192 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 IRF4Q15306 451 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 RTL6Q6ICC9 239 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 GPR148Q8TDV2 347 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 CMBLQ96DG6 245 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 CLSTN3Q9BQT9 956 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ETV7Q9Y603 341 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 HIST1H3AP68431 136 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 PRR27Q6MZM9 219 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ZNF620Q6ZNG0 422 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 SDR9C7Q8NEX9 313 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 PTRH2Q9Y3E5 179 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ZNF487B1APH4 448 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 KDM4EB2RXH2 506 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 XRCC2O43543 280 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 CPEP16870 476 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 AGFG1P52594 562 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 VWA1Q6PCB0 445 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ATOH1Q92858 354 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 DHCR7Q9UBM7 475 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ADAM11O75078 769 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 OR7C1O76099 320 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 SDC1P18827 310 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 HBG1P69891 147 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 HBG2P69892 147 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 ELAVL1Q15717 326 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 LTB4RQ15722 352 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 COMMD6Q7Z4G1 85 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 BMFQ96LC9 184 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 NOL4LQ96MY1 436 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 CDCA4Q9BXL8 241 aa10.18□□□□□ -0.78
CDC42BPA-205ENST00000366769 LRP6O75581 1613 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 SGK494L7N484 410 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 GALR1P47211 349 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 GSG1Q2KHT4 349 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 HSD17B13Q7Z5P4 300 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 SYT9Q86SS6 491 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 SERINC5Q86VE9 423 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 OR5D14Q8NGL3 314 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 BET1LQ9NYM9 111 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 DMRT1Q9Y5R6 373 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 FRMPD3Q5JV73 1810 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 ENPP1P22413 925 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 SLC6A11P48066 632 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 ATP1B3P54709 279 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 MLF2Q15773 248 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 MDGA2Q7Z553 956 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 GGACTQ9BVM4 153 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 SHARPINQ9H0F6 387 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 MTCP1P56278 107 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 UQCC1Q9NVA1 299 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 IGLV3-22A0A075B6J6 115 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 OR2J2O76002 312 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 FGF18O76093 207 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 PLEKHS1Q5SXH7 462 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 FIGLAQ6QHK4 219 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 OR5AP2Q8NGF4 316 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 OR5K2Q8NHB8 316 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 LPAR4Q99677 370 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 SGPP1Q9BX95 441 aa10.17□□□□□ -0.78
CDC42BPA-205ENST00000366769 NGBQ9NPG2 151 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms