RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 RFPL4AA6NLU0 287 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 RFPL4AL1F8VTS6 287 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 MPC2O95563 127 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 CNOT4O95628 575 aaKnown RBP12.59□□□□□ -0.39
COL6A1-201ENST00000361866 DBHP09172 617 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 OR13C7P0DN81 318 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 CXCL2P19875 107 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 CD1CP29017 333 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF136P52737 540 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 LAMTOR1Q6IAA8 161 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 PRR18Q8N4B5 295 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 OR1S2Q8NGQ3 325 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 SCGB1C1Q8TD33 95 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 SLC7A11Q9UPY5 501 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 ANKRD20A5PA0PJZ0 165 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 FAM221BA6H8Z2 402 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 DUX1O43812 170 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF354AO60765 605 aaPredicted RBP12.59□□□□□ -0.39
COL6A1-201ENST00000361866 WDPCPO95876 746 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 PHLDA2Q53GA4 152 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 NANPQ8TBE9 248 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 BORCS8Q96FH0 119 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 NICN1Q9BSH3 213 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 CNTNAP3Q9BZ76 1288 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 TAF9BQ9HBM6 251 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 DNAJB12Q9NXW2 375 aaKnown RBP12.59□□□□□ -0.39
COL6A1-201ENST00000361866 ZMAT5Q9UDW3 170 aaKnown RBP12.59□□□□□ -0.39
COL6A1-201ENST00000361866 GPR160Q9UJ42 338 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 FAM96BQ9Y3D0 163 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 GREB1Q4ZG55 1949 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 OR5K3A6NET4 321 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 SLC17A2O00624 439 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 NME2P1O60361 137 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 ICOSLGO75144 302 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 EML2O95834 649 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 CFIP05156 583 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF84P51523 738 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 AKR1C8PQ5T2L2 129 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 CD200R1LQ6Q8B3 271 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 GVQW1Q8N7I0 195 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 SUMF2Q8NBJ7 301 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 OR4D10Q8NGI6 311 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 KCNG3Q8TAE7 436 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 ZPLD1Q8TCW7 415 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 SEMA6CQ9H3T2 930 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 FBXO7Q9Y3I1 522 aa12.59□□□□□ -0.39
COL6A1-201ENST00000361866 TMEM200CA6NKL6 621 aa12.58□□□□□ -0.39
COL6A1-201ENST00000361866 TMEM229AB2RXF0 380 aa12.58□□□□□ -0.39
COL6A1-201ENST00000361866 G3V3Y1 287 aa12.58□□□□□ -0.39
COL6A1-201ENST00000361866 HRKO00198 91 aa12.58□□□□□ -0.39
COL6A1-201ENST00000361866 CTAG2O75638 210 aa12.58□□□□□ -0.39
COL6A1-201ENST00000361866 NXPH3O95157 252 aa12.58□□□□□ -0.39
COL6A1-201ENST00000361866 POLR2HP52434 150 aaKnown RBP12.58□□□□□ -0.39
COL6A1-201ENST00000361866 C19orf48Q6RUI8 117 aa12.58□□□□□ -0.39
COL6A1-201ENST00000361866 CPEB2Q7Z5Q1 589 aaKnown RBP12.58□□□□□ -0.39
COL6A1-201ENST00000361866 IFT22Q9H7X7 185 aa12.58□□□□□ -0.39
COL6A1-201ENST00000361866 CACNA1DQ01668 2161 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 TRAV20A0A0B4J274 112 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 IGKV1-8A0A0C4DH67 115 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 A8MVM7 634 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 KCNAB3O43448 404 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 DIRAS3O95661 229 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 IFNA17P01571 189 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 DEFA6Q01524 100 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 C11orf87Q6NUJ2 197 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 FBXW12Q6X9E4 464 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 OR11G2Q8NGC1 345 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 LUZP4Q9P127 313 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 DOCK6Q96HP0 2047 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 LILRB5O75023 590 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 ETFDHQ16134 617 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 C1QL3Q5VWW1 255 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 LPCAT3Q6P1A2 487 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 GLYATL2Q8WU03 294 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 SGCZQ96LD1 299 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 ZNF681Q96N22 645 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 SUSD2Q9UGT4 822 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 TRIOBPQ9H2D6 2365 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 NYNRINQ9P2P1 1898 aaKnown RBP12.58□□□□□ -0.4
COL6A1-201ENST00000361866 OR7C1O76099 320 aaPredicted RBP12.58□□□□□ -0.4
COL6A1-201ENST00000361866 IFNA5P01569 189 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 CSF2RBP32927 897 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 MTCP1P56278 107 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 HTRA4P83105 476 aaPredicted RBP12.58□□□□□ -0.4
COL6A1-201ENST00000361866 PPP1R1AQ13522 171 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 ZNF74Q16587 644 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 PDZD11Q5EBL8 140 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 TMEM196Q5HYL7 178 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 PLXDC1Q8IUK5 500 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 CBLN2Q8IUK8 224 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 ZNF695Q8IW36 515 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 OR56B1Q8NGI3 324 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 COX14Q96I36 57 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 SLC46A1Q96NT5 459 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 CMSS1Q9BQ75 279 aaKnown RBP12.58□□□□□ -0.4
COL6A1-201ENST00000361866 ADAT1Q9BUB4 502 aaKnown RBP12.58□□□□□ -0.4
COL6A1-201ENST00000361866 MRM2Q9UI43 246 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms