RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 ACKR1Q16570 336 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 CCSMST1Q4G0I0 132 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 PAQR8Q8TEZ7 354 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 IKZF5Q9H5V7 419 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 MYH11P35749 1972 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 EPHA8P29322 1005 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-203ENST00000361654 BTG2P78543 158 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 PLK5Q496M5 336 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 M1APQ8TC57 530 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 RND1Q92730 232 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 RDH5Q92781 318 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 GRAMD2BQ96HH9 432 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 SARGQ9BW04 601 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 UBQLN3Q9H347 655 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 ZCCHC4Q9H5U6 513 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 PLA2G3Q9NZ20 509 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 LAMA4Q16363 1823 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 RPS10-NUDT3A0A1W2PQS6 291 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 AQP7O14520 342 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 SPRY3O43610 288 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 B3GALT4O96024 378 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 OR5G3P0C626 314 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 DDOSTP39656 456 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 CARFQ8N187 725 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 C16orf52Q8NHV5 167 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 CCL4L1Q8NHW4 92 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 ASB5Q8WWX0 329 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 TEX101Q9BY14 249 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 OR11A1Q9GZK7 315 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 ACKR3P25106 362 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 GABRB3P28472 473 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 SDHAP31040 664 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 CEACAM3P40198 252 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 UBE2IP63279 158 aaKnown RBP9.97□□□□□ -0.81
CLIP1-203ENST00000361654 MC2RQ01718 297 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 NUMA1Q14980 2115 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 IAH1Q2TAA2 248 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-203ENST00000361654 AGBL4Q5VU57 503 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 OR51A4Q8NGJ6 313 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 LGALS14Q8TCE9 139 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 DEDD2Q8WXF8 326 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 LIN7CQ9NUP9 197 aaKnown RBP9.97□□□□□ -0.81
CLIP1-203ENST00000361654 KDM3BQ7LBC6 1761 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 A0A1W2PR48 441 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 CEACAM5P06731 702 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 SNRPBP14678 240 aaKnown RBP9.97□□□□□ -0.81
CLIP1-203ENST00000361654 DTYMKP23919 212 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 MICBQ29980 383 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 PHLDA2Q53GA4 152 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 GUSBP11Q6P575 273 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 DBX2Q6ZNG2 339 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 OR1M1Q8NGA1 313 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 ROBO4Q8WZ75 1007 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 REEP6Q96HR9 211 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 NAA50Q9GZZ1 169 aaKnown RBP9.97□□□□□ -0.81
CLIP1-203ENST00000361654 FBXL4Q9UKA2 621 aa9.97□□□□□ -0.81
CLIP1-203ENST00000361654 DIMT1Q9UNQ2 313 aaKnown RBP9.97□□□□□ -0.81
CLIP1-203ENST00000361654 RP1L1Q8IWN7 2480 aaPredicted RBP9.96□□□□□ -0.81
CLIP1-203ENST00000361654 SMIM17P0DL12 118 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 APEX1P27695 318 aaKnown RBP9.96□□□□□ -0.81
CLIP1-203ENST00000361654 HNRNPFP52597 415 aaKnown RBP9.96□□□□□ -0.81
CLIP1-203ENST00000361654 UBE2KP61086 200 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 OR8G2PQ6IF36 304 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 STEAP1BQ6NZ63 245 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 TMEM65Q6PI78 240 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 COMMD7Q86VX2 200 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 GALNT16Q8N428 558 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 C20orf85Q9H1P6 137 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 ASIC5Q9NY37 505 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 CDX4O14627 284 aaPredicted RBP9.96□□□□□ -0.81
CLIP1-203ENST00000361654 ZDHHC11BP0C7U3 371 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 SOX18P35713 384 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 CLDN12P56749 244 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 GSG1Q2KHT4 349 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 C2orf76Q3KRA6 126 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 OR52N1Q8NH53 320 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 FAM213BQ8TBF2 198 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 OR51E1Q8TCB6 317 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 FAM122AQ96E09 287 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 FYTTD1Q96QD9 318 aaKnown RBP9.96□□□□□ -0.81
CLIP1-203ENST00000361654 TAAR6Q96RI8 345 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 SLC17A4Q9Y2C5 497 aa9.96□□□□□ -0.81
CLIP1-203ENST00000361654 CXorf51AA0A1B0GTR3 108 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 TCRBV3S1A0A5B6 114 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 SOD1P00441 154 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 CYC1P08574 325 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 FOLR1P15328 257 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 ELK1P19419 428 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 DUSP8Q13202 625 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 HTR4Q13639 388 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 SYT6Q5T7P8 510 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-203ENST00000361654 HIST2H3PS2Q5TEC6 136 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 BPIFCQ8NFQ6 507 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 ST8SIA2Q92186 375 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 RPEQ96AT9 228 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 PSD2Q9BQI7 771 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 GPR87Q9BY21 358 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 C20orf27Q9GZN8 174 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 MBD1Q9UIS9 605 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-203ENST00000361654 AMMECR1Q9Y4X0 333 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms