RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ELOBQ15370 118 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 OR2G6Q5TZ20 316 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 OR8U1Q8NH10 309 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 OR51M1Q9H341 326 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SHPKQ9UHJ6 478 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 C7orf66A4D0T2 115 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ADAM11O75078 769 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 P04436 131 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CD99P14209 185 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SLC11A1P49279 550 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 EXT1Q16394 746 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 C1QTNF12Q5T7M4 302 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 H1FNTQ75WM6 255 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 IGSF8Q969P0 613 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ATP5SQ99766 215 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 FZD3Q9NPG1 666 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 IL20RAQ9UHF4 553 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 B4GALT2O60909 372 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CHRM4P08173 479 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SDHAP31040 664 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 RPS23P62266 143 aaKnown RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF573Q86YE8 665 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SPSB1Q96BD6 273 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 NGBQ9NPG2 151 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 PTGDR2Q9Y5Y4 395 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 NUPL2O15504 423 aaKnown RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 KIR2DL3P43628 341 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CDK5R1Q15078 307 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 MRM1Q6IN84 353 aaKnown RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 POMZP3Q6PJE2 187 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 Q7L0L9 218 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ARFGAP1Q8N6T3 406 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CPEB3Q8NE35 698 aaKnown RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CA11O75493 328 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF154Q13106 437 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 LRRC73Q5JTD7 316 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 COL5A1-AS1Q5SY13 56 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 BVESQ8NE79 360 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ANGPTL4Q9BY76 406 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 UBE2ZQ9H832 354 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 RALGAPA2Q2PPJ7 1873 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CHRNB4P30926 498 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SGCAQ16586 387 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 C12orf54Q6X4T0 127 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SLC35E3Q7Z769 313 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 PRAMEF26H0Y7S4 382 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ORM1P02763 201 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 C17orf67Q0P5P2 114 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 VAMP3Q15836 100 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ACY3Q96HD9 319 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ST6GALNAC5Q9BVH7 336 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 MFRPQ9BY79 579 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 MRPS28Q9Y2Q9 187 aaKnown RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 PRKAB1Q9Y478 270 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 TRBV5-4A0A0C4DH59 114 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 FAM24AA6NFZ4 105 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 TRAPPC6AO75865 159 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CTSAP10619 480 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 GLB1P16278 677 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SERPINA2P20848 420 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 APLNRP35414 380 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 TP53I3Q53FA7 332 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 TRMT12Q53H54 448 aaKnown RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SOWAHCQ53LP3 525 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 Q6ZRG5 221 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CLECL1Q8IZS7 167 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 IKZF4Q9H2S9 585 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 PLSCR5A0PG75 271 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CLDN1O95832 211 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CLDN15P56746 228 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.02□□□□□ -1.454e-6■■■■■ 36.9
VPS13B-202ENST00000357162 OR52W1Q6IF63 320 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 ADAM5Q6NVV9 412 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 GDF7Q7Z4P5 450 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 LRP5O75197 1615 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 PATJQ8NI35 1801 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 A0A1B0GWA3 101 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 OR5AC1P0C628 307 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SFTA3P0C7M3 94 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 F3P13726 295 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SNRPBP14678 240 aaKnown RBP6.02□□□□□ -1.45
VPS13B-202ENST00000357162 SLC6A11P48066 632 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 RAET1LQ5VY80 246 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 MFSD12Q6NUT3 480 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 NPSR1Q6W5P4 371 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 OR4C5Q8NGB2 326 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 RHOFQ9HBH0 211 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CCDC187A0A096LP49 1063 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CIDEAO60543 219 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 CLN5O75503 358 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 FZD1Q9UP38 647 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 DOT1LQ8TEK3 1739 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 H3BNC9 293 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 HOXB2P14652 356 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF28P17035 718 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 BSGP35613 385 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 BATFQ16520 125 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 FIGLAQ6QHK4 219 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 TBPL2Q6SJ96 375 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 HSD17B11Q8NBQ5 300 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms