RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 DCLRE1CQ96SD1 692 aaKnown RBP15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 SH3GL3Q99963 347 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 SLIRPQ9GZT3 109 aaKnown RBP15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 KCNN2Q9H2S1 579 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 MALT1Q9UDY8 824 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 ZNF835Q9Y2P0 537 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 SHANK1Q9Y566 2161 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 SPTA1P02549 2419 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 RER1O15258 196 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 GPRIN2O60269 458 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 ZNF254O75437 659 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 SC5DO75845 299 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 RPP14O95059 124 aaKnown RBP15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 SFTPCP11686 197 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 GDI2P50395 445 aaKnown RBP15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 NANOS3P60323 173 aaKnown RBP15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 ARF1P84077 181 aaKnown RBP15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 FAPQ12884 760 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 STK11Q15831 433 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 C9orf135Q5VTT2 229 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 FDX2Q6P4F2 183 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 VWA1Q6PCB0 445 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 LINC00299Q6ZSB3 139 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 KRT77Q7Z794 578 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 DOLPP1Q86YN1 238 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 UBE2J2Q8N2K1 259 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 OR2AJ1Q8NGZ0 328 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 ABHD4Q8TB40 342 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 SLAMF6Q96DU3 332 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 FBXO17Q96EF6 278 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 MED18Q9BUE0 208 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 C1orf198Q9H425 327 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 PNRC2Q9NPJ4 139 aaKnown RBP15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 UPB1Q9UBR1 384 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 EMC9Q9Y3B6 208 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 LRP12Q9Y561 859 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 PMF1-BGLAPU3KQ54 211 aa15.93■□□□□ 0.14
SMARCD3-202ENST00000356800 TTLL8A6PVC2 850 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 ERVH48-1M5A8F1 160 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 IL1AP01583 271 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 OPRL1P41146 370 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 HIST1H3AP68431 136 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 HIST2H3PS2Q5TEC6 136 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 FBXW9Q5XUX1 488 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 OR7E24Q6IFN5 339 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 KLHL24Q6TFL4 600 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 HIST2H3AQ71DI3 136 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 RHOUQ7L0Q8 258 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 SLC22A24Q8N4F4 322 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 CNEP1R1Q8N9A8 125 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 TBC1D15Q8TC07 691 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 GALNT8Q9NY28 637 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 A3GALT2U3KPV4 340 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 SLC19A2O60779 497 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 TNFSF13O75888 250 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 SERPINA3P01011 423 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 CST2P09228 141 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 RPS19P39019 145 aaKnown RBP15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 ALKBH1Q13686 389 aaKnown RBP15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 ZNF813Q6ZN06 617 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 ZNF627Q7L945 461 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 NAXEQ8NCW5 288 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 CENPMQ9NSP4 180 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 FBXL3Q9UKT7 428 aa15.92■□□□□ 0.14
SMARCD3-202ENST00000356800 PRRG2O14669 202 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 SRSF10O75494 262 aaKnown RBP15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 PNPP00491 289 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 ITGA5P08648 1049 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 HOXD4P09016 255 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 CD8BP10966 210 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 EDN3P14138 238 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 TIMP3P35625 211 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 RIDAP52758 137 aaKnown RBP15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 INSL4Q14641 139 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 NRN1LQ496H8 165 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 BTLAQ7Z6A9 289 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 SKA3Q8IX90 412 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 OR6K3Q8NGY3 331 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 OR2G2Q8NGZ5 317 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 FGFBP3Q8TAT2 258 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 TP63Q9H3D4 680 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 FRRS1LQ9P0K9 344 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 ZNF281Q9Y2X9 895 aa15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 RP1L1Q8IWN7 2480 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-202ENST00000356800 USP24Q9UPU5 2620 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 ZFPL1O95159 310 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 IL18BPO95998 194 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 PATE4P0C8F1 98 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 SOX6P35712 828 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 CCR9P51686 369 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 PER3P56645 1201 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 RPS11P62280 158 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 MFGE8Q08431 387 aaPredicted RBP15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 ACSM3Q53FZ2 586 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 CCDC92Q53HC0 331 aaPredicted RBP15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 YIF1BQ5BJH7 314 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 PAMR1Q6UXH9 720 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 STARD4Q96DR4 205 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 PDCD1LG2Q9BQ51 273 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 NXF2Q9GZY0 626 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms