RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DCTN6O00399 190 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PRODHO43272 600 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SGCEO43556 437 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SMPD2O60906 423 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 MITFO75030 526 aaPredicted RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 GLCEO94923 617 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PATE4P0C8F1 98 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PRR23D2P0DMB1 279 aaPredicted RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 NR4A1P22736 598 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 APOBEC3AP31941 199 aaPredicted RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PYCR1P32322 319 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 HTR5AP47898 357 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ENTPD1P49961 510 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 GDI2P50395 445 aaKnown RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ALDH3A2P51648 485 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 RAD23AP54725 363 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PSG4Q00888 419 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 HGFACQ04756 655 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PIGFQ07326 219 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 EFNB3Q15768 340 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ZNF362Q5T0B9 420 aaPredicted RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SLC18B1Q6NT16 456 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ACSM5Q6NUN0 579 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 UGT2A3Q6UWM9 527 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 UNQ6126/PRO20091Q6UXV3 157 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 C1orf174Q8IYL3 243 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 CYB561A3Q8NBI2 242 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 OR9Q1Q8NGQ5 310 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 AKR7LQ8NHP1 331 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SMAP2Q8WU79 429 aaPredicted RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 NRGNQ92686 78 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 MISP3Q96FF7 219 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 POM121L2Q96KW2 1035 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 TSSK2Q96PF2 358 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 BCL2L14Q9BZR8 327 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 CXXC4Q9H2H0 198 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 RERGLQ9H628 205 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 MARCH7Q9H992 704 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 LHFPL6Q9Y693 200 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 COMMD3-BMI1R4GMX3 469 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 CACNA1DQ01668 2161 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 PRR14LQ5THK1 2151 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 B9A039 149 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 E9PQ18 207 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 OVOL3O00110 214 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 EI24O14681 340 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 SYNGR3O43761 229 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 TFP02787 698 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 ALPLP05186 524 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 ZNF823P16415 610 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 SLC2A5P22732 501 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 STOMP27105 288 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 APEX1P27695 318 aaKnown RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 FMO3P31513 532 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 TTKP33981 857 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 GLRXP35754 106 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 PTH2RP49190 550 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 EVX1P49640 407 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 RGS6P49758 472 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 PPOXP50336 477 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 SNRPD2P62316 118 aaKnown RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 ECH1Q13011 328 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 ADIPOQQ15848 244 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 PCK2Q16822 640 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 KRTAP27-1Q3LI81 207 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 CCDC92Q53HC0 331 aaPredicted RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 TEX30Q5JUR7 227 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 LINC01590Q5TEZ4 76 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 ZNF774Q6NX45 483 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 CXXC5Q7LFL8 322 aaKnown RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 GID4Q8IVV7 300 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 MUC15Q8N387 334 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 GJC3Q8NFK1 279 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 OR2AJ1Q8NGZ0 328 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 OR1F12Q8NHA8 337 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 MRPL24Q96A35 216 aaKnown RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 RDH12Q96NR8 316 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 FOXN4Q96NZ1 517 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 INTS14Q96SY0 518 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 PITX2Q99697 317 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 CIB1Q99828 191 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 LIME1Q9H400 295 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 RIBC2Q9H4K1 309 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 ELOVL3Q9HB03 270 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 BARX1Q9HBU1 254 aaPredicted RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 HINT3Q9NQE9 182 aaKnown RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 CA10Q9NS85 328 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 ZNF701Q9NV72 531 aaPredicted RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 MRPL22Q9NWU5 206 aaKnown RBP3.42□□□□□ -1.86
CNOT4-202ENST00000356162 ASH2LQ9UBL3 628 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 CMAHPQ9Y471 501 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 RNF114Q9Y508 228 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 COL12A1Q99715 3063 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 DSCAMO60469 2012 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 HECTD1Q9ULT8 2610 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 NBPF19A0A087WUL8 3843 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 CCDC182A6NF36 153 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 H7C417 338 aa3.42□□□□□ -1.86
CNOT4-202ENST00000356162 GPRIN2O60269 458 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms