RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PLEKHG7Q6ZR37 379 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 VASH1Q7L8A9 365 aaPredicted RBP16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 CPEB3Q8NE35 698 aaKnown RBP16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 GJC3Q8NFK1 279 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 CA5BP1Q8WTZ4 195 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 SLC7A6Q92536 515 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 RNF166Q96A37 237 aaPredicted RBP16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 ACTR6Q9GZN1 396 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 KCNN2Q9H2S1 579 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 RNF121Q9H920 327 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 ACOT13Q9NPJ3 140 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 TIMM10BQ9Y5J6 103 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 SNX5Q9Y5X3 404 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 MYO18BQ8IUG5 2567 aa16.56■□□□□ 0.24
CHMP4A-201ENST00000347519 J3QLW9 94 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 LALBAP00709 142 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF19P17023 458 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 OPRL1P41146 370 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 UBE2NP61088 152 aaKnown RBP16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 PCBD1P61457 104 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 RAB1AP62820 205 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 ROM1Q03395 351 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 TFF3Q07654 80 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 SCRN3Q0VDG4 424 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 RSPO1Q2MKA7 263 aaPredicted RBP16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 XAF1Q6GPH4 301 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 KCTD8Q6ZWB6 473 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 MYPOPQ86VE0 399 aaPredicted RBP16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 RTTNQ86VV8 2226 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF584Q8IVC4 421 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 C17orf78Q8N4C9 275 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 KLHL36Q8N4N3 616 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 SNX33Q8WV41 574 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 ASB17Q8WXJ9 295 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 C4orf36Q96KX1 117 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 C1QTNF6Q9BXI9 259 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 HDHD5Q9BXW7 423 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 ELOVL3Q9HB03 270 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 IKZF2Q9UKS7 526 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 FBXL3Q9UKT7 428 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 CAB39Q9Y376 341 aaPredicted RBP16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 SLC25A15Q9Y619 301 aa16.55■□□□□ 0.24
CHMP4A-201ENST00000347519 TMEM129A0AVI4 362 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 E9PI62 339 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 C16orf97H3BN30 126 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 PHYHO14832 338 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 SGCEO43556 437 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 SYNGR3O43761 229 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 DOK2O60496 412 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 UBL3O95164 117 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 CELA3BP08861 270 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 HOXB1P14653 301 aaPredicted RBP16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 EGR3Q06889 387 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 SRSF1Q07955 248 aaKnown RBP eCLIP16.54■□□□□ 0.241e-6■□□□□ 9.8
CHMP4A-201ENST00000347519 SNTB1Q13884 538 aaKnown RBP16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 RAB39AQ14964 217 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 RAB35Q15286 201 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 TBCEQ15813 527 aaPredicted RBP16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 ELFN2Q5R3F8 820 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 KRT77Q7Z794 578 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 STEAP2Q8NFT2 490 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 GATAD2BQ8WXI9 593 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 RNASE6Q93091 150 aaKnown RBP16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 WACQ9BTA9 647 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 ACOXLQ9NUZ1 547 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 CHCHD3Q9NX63 227 aaKnown RBP16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 PLEK2Q9NYT0 353 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 GNG8Q9UK08 70 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 ERGIC3Q9Y282 383 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 GRIP1Q9Y3R0 1128 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 LRP12Q9Y561 859 aa16.54■□□□□ 0.24
CHMP4A-201ENST00000347519 OR6C6A6NF89 314 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 METTL15A6NJ78 407 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 MYL12BO14950 172 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 DBHP09172 617 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 ANOS1P23352 680 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 PSMB10P40306 273 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 TAB1Q15750 504 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 NEDD8Q15843 81 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 GSG1Q2KHT4 349 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 TIMM23BQ5SRD1 257 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 TMEM53Q6P2H8 277 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF679Q8IYX0 411 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 SVOPQ8N4V2 548 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF808Q8N4W9 903 aaPredicted RBP16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 OR52N1Q8NH53 320 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 OR1F12Q8NHA8 337 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 PELI1Q96FA3 418 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 MS4A3Q96HJ5 214 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 MND1Q9BWT6 205 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 KCNJ16Q9NPI9 418 aa16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 DDX28Q9NUL7 540 aaKnown RBP16.53■□□□□ 0.24
CHMP4A-201ENST00000347519 ZNF878C9JN71 531 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 INMTO95050 263 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 CLDN14O95500 239 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 KRT8P05787 483 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 THBDP07204 575 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 H2BFMP0C1H6 154 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 AGAP20933 346 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 APEX1P27695 318 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms