RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 OR52E2Q8NGJ4 325 aa12.48□□□□□ -0.41
ERCC1-203ENST00000340192 OR8D4Q8NGM9 314 aa12.48□□□□□ -0.41
ERCC1-203ENST00000340192 CANT1Q8WVQ1 401 aa12.48□□□□□ -0.41
ERCC1-203ENST00000340192 DGCR6LQ9BY27 220 aa12.48□□□□□ -0.41
ERCC1-203ENST00000340192 RACGAP1Q9H0H5 632 aa12.48□□□□□ -0.41
ERCC1-203ENST00000340192 TBC1D23Q9NUY8 699 aa12.48□□□□□ -0.41
ERCC1-203ENST00000340192 LHFPL6Q9Y693 200 aa12.48□□□□□ -0.41
ERCC1-203ENST00000340192 SONP18583 2426 aaKnown RBP12.47□□□□□ -0.41
ERCC1-203ENST00000340192 OR6C6A6NF89 314 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 A8MV72 311 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-203ENST00000340192 H3BSA7 217 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 CRLF1O75462 422 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 DNAJC8O75937 253 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-203ENST00000340192 TFP02787 698 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 MT-ND5P03915 603 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 ZNF16P17020 682 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-203ENST00000340192 ZNF23P17027 643 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 GSTM3P21266 225 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 COL8A2P25067 703 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 FLOT2Q14254 428 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 PCGF3Q3KNV8 242 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 CORO6Q6QEF8 472 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 SLC26A10Q8NG04 563 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 OR1F12Q8NHA8 337 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 SLC7A6Q92536 515 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 RDH5Q92781 318 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 YIPF5Q969M3 257 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 CHODLQ9H9P2 273 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 GRIP1Q9Y3R0 1128 aa12.47□□□□□ -0.41
ERCC1-203ENST00000340192 SVEP1Q4LDE5 3571 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 CUBNO60494 3623 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 LRP5LA4QPB2 252 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 LILRA1O75019 489 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 SOX14O95416 240 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 HLA-DQA2P01906 255 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 DBHP09172 617 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 TACSTD2P09758 323 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 ACHEP22303 614 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 GZMKP49863 264 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 ZNF81P51508 661 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 MMP15P51511 669 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 HIST1H3AP68431 136 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 MRPS11P82912 194 aaKnown RBP12.46□□□□□ -0.41
ERCC1-203ENST00000340192 TEKQ02763 1124 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 GK3PQ14409 553 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 TRIP10Q15642 601 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 ZNF362Q5T0B9 420 aaPredicted RBP12.46□□□□□ -0.41
ERCC1-203ENST00000340192 HIST2H3PS2Q5TEC6 136 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 HIST2H3AQ71DI3 136 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 SPATA24Q86W54 205 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 LNX2Q8N448 690 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 CYB561A3Q8NBI2 242 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 GJC3Q8NFK1 279 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 OR10G2Q8NGC3 310 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 NIPSNAP1Q9BPW8 284 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 TSSK6Q9BXA6 273 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 POFUT1Q9H488 388 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 ZNF275Q9NSD4 429 aaPredicted RBP12.46□□□□□ -0.41
ERCC1-203ENST00000340192 TBCCD1Q9NVR7 557 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 NKIRAS2Q9NYR9 191 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 ATPIF1Q9UII2 106 aa12.46□□□□□ -0.41
ERCC1-203ENST00000340192 MALRD1Q5VYJ5 2156 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 ABCA2Q9BZC7 2435 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 PLSCR5A0PG75 271 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 GNGT2O14610 69 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 CHN2P52757 468 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 COX10Q12887 443 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 BNIP1Q12981 228 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 TSTQ16762 297 aaKnown RBP12.45□□□□□ -0.42
ERCC1-203ENST00000340192 SLC36A3Q495N2 470 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 TMEM179BQ7Z7N9 219 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 LINC00346Q8IVM7 164 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 PROKR2Q8NFJ6 384 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 OR2T33Q8NG76 320 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 GIPC3Q8TF64 312 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 MSI2Q96DH6 328 aaKnown RBP12.45□□□□□ -0.42
ERCC1-203ENST00000340192 DDOQ99489 341 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 FEVQ99581 238 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 SOX7Q9BT81 388 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 CDADC1Q9BWV3 514 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 CADM1Q9BY67 442 aaKnown RBP12.45□□□□□ -0.42
ERCC1-203ENST00000340192 HDHD2Q9H0R4 259 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 DECR2Q9NUI1 292 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 ARMC1Q9NVT9 282 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 POMPQ9Y244 141 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 STARD10Q9Y365 291 aa12.45□□□□□ -0.42
ERCC1-203ENST00000340192 TANC2Q9HCD6 1990 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 LOC100289279A0A1B0GTE1 492 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 TCRBV3S1A0A5B6 114 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 ARRDC5A6NEK1 342 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 ZSCAN5BA6NJL1 495 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 GSC2O15499 205 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 TPD52L2O43399 206 aaKnown RBP12.44□□□□□ -0.42
ERCC1-203ENST00000340192 SPRY3O43610 288 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 TIMM8AO60220 97 aaPredicted RBP12.44□□□□□ -0.42
ERCC1-203ENST00000340192 CDC14BO60729 498 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 RP2O75695 350 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 IGHV1-46P01743 117 aa12.44□□□□□ -0.42
ERCC1-203ENST00000340192 HOXB6P17509 224 aaKnown RBP12.44□□□□□ -0.42
ERCC1-203ENST00000340192 TUBG1P23258 451 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms