RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 LINC00346Q8IVM7 164 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 C1orf174Q8IYL3 243 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 OR1F12Q8NHA8 337 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 OTOSQ8NHW6 89 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 POM121L2Q96KW2 1035 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 COQ7Q99807 217 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 OR6C6A6NF89 314 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 SHISA9B4DS77 424 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 PCSK6P29122 969 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 RAD52P43351 418 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 HTR5AP47898 357 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 MTNR1AP48039 350 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 GALK2Q01415 458 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 MAD2L1BPQ15013 274 aaPredicted RBP13.32□□□□□ -0.28
SEC13-201ENST00000337354 IZUMO2Q6UXV1 221 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 USP51Q70EK9 711 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 MYPOPQ86VE0 399 aaPredicted RBP13.32□□□□□ -0.28
SEC13-201ENST00000337354 CDC20BQ86Y33 519 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 C8orf59Q8N0T1 100 aaPredicted RBP13.32□□□□□ -0.28
SEC13-201ENST00000337354 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 MAP6Q96JE9 813 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 DCLRE1CQ96SD1 692 aaKnown RBP13.32□□□□□ -0.28
SEC13-201ENST00000337354 CNN2Q99439 309 aaKnown RBP13.32□□□□□ -0.28
SEC13-201ENST00000337354 CDH20Q9HBT6 801 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 DNAJC27Q9NZQ0 273 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 EIF3KQ9UBQ5 218 aaKnown RBP13.32□□□□□ -0.28
SEC13-201ENST00000337354 POU2F3Q9UKI9 436 aa13.32□□□□□ -0.28
SEC13-201ENST00000337354 NAV2Q8IVL1 2488 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ANKHD1Q8IWZ3 2542 aaKnown RBP13.31□□□□□ -0.28
SEC13-201ENST00000337354 LOC100509620A0A075B734 347 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 C5orf49A4QMS7 147 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 SELENOFO60613 162 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ICMTO60725 284 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 CLIC3O95833 236 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 LYNP07948 512 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 SBK2P0C263 348 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ALOX5APP20292 161 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 NR4A1P22736 598 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 CALCRP30988 508 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ATP6V1E1P36543 226 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 RPS27P42677 84 aaKnown RBP13.31□□□□□ -0.28
SEC13-201ENST00000337354 SLC15A1P46059 708 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 EIF2B1Q14232 305 aaKnown RBP13.31□□□□□ -0.28
SEC13-201ENST00000337354 ZNF672Q499Z4 452 aaPredicted RBP13.31□□□□□ -0.28
SEC13-201ENST00000337354 CFAP77Q6ZQR2 320 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ST7LQ8TDW4 575 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ASB17Q8WXJ9 295 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ATF6BQ99941 703 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ABHD6Q9BV23 337 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ADGRL4Q9HBW9 690 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 PNRC2Q9NPJ4 139 aaKnown RBP13.31□□□□□ -0.28
SEC13-201ENST00000337354 DDX28Q9NUL7 540 aaKnown RBP13.31□□□□□ -0.28
SEC13-201ENST00000337354 CISD1Q9NZ45 108 aaKnown RBP13.31□□□□□ -0.28
SEC13-201ENST00000337354 LAMP5Q9UJQ1 280 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 EDARQ9UNE0 448 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 RPL36Q9Y3U8 105 aaKnown RBP13.31□□□□□ -0.28
SEC13-201ENST00000337354 PCDHGB1Q9Y5G3 927 aa13.31□□□□□ -0.28
SEC13-201ENST00000337354 ATP6V1G2-DDX39BF2Z307 99 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 PHYHO14832 338 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 PLAUP00749 431 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 OR2T7P0C7T2 308 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 CCNOP22674 350 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 TUBG1P23258 451 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 NAA10P41227 235 aaPredicted RBP13.3□□□□□ -0.28
SEC13-201ENST00000337354 UCP2P55851 309 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 HGFACQ04756 655 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 SNCBQ16143 134 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 TMEM154Q6P9G4 183 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 KCTD18Q6PI47 426 aaPredicted RBP13.3□□□□□ -0.28
SEC13-201ENST00000337354 THAP5Q7Z6K1 395 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 KBTBD8Q8NFY9 601 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 OR51G2Q8NGK0 314 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 OR2T27Q8NH04 317 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 LILRB1Q8NHL6 650 aaPredicted RBP13.3□□□□□ -0.28
SEC13-201ENST00000337354 THEM6Q8WUY1 208 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 RNF133Q8WVZ7 376 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 APH1BQ8WW43 257 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 AKAP1Q92667 903 aaKnown RBP eCLIP13.3□□□□□ -0.28
SEC13-201ENST00000337354 SPTSSAQ969W0 71 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 SLAMF6Q96DU3 332 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 BCL2L14Q9BZR8 327 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 PLEKHF2Q9H8W4 249 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 ELOVL3Q9HB03 270 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 TUBG2Q9NRH3 451 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 TBCCD1Q9NVR7 557 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 ATP23Q9Y6H3 246 aa13.3□□□□□ -0.28
SEC13-201ENST00000337354 MAST4O15021 2626 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 ZNF878C9JN71 531 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 J3QW42 95 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 HS3ST1O14792 307 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 APOC1P02654 83 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 MRPL3P09001 348 aaKnown RBP13.29□□□□□ -0.28
SEC13-201ENST00000337354 CCL2P13500 99 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 GLRXP35754 106 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 RGS6P49758 472 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 NKX6-1P78426 367 aaPredicted RBP13.29□□□□□ -0.28
SEC13-201ENST00000337354 SPOCK1Q08629 439 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 TAF13Q15543 124 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 KRTAP27-1Q3LI81 207 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 C6orf52Q5T4I8 152 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms