RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OPRM1P35372 400 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 GUCA1AP43080 201 aaPredicted RBP14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 OR12D2P58182 307 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 KRTAP10-9P60411 292 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 LCN6P62502 163 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 ROM1Q03395 351 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 KCNMB1Q16558 191 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 CNEP1R1Q8N9A8 125 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 OR9K2Q8NGE7 335 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 SMIM19Q96E16 107 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 PELI1Q96FA3 418 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 TXNDC15Q96J42 360 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 CENPOQ9BU64 300 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 MED29Q9NX70 200 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF175Q9Y473 711 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 GPR171O14626 319 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 GATBO75879 557 aaKnown RBP14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF432O94892 652 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 LALBAP00709 142 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 LAP3P28838 519 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 RUNX1T1Q06455 604 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 CDK5R1Q15078 307 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 FBXL19-AS1Q494R0 122 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF404Q494X3 552 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 FDX2Q6P4F2 183 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF474Q6S9Z5 364 aaPredicted RBP14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 SLC26A10Q8NG04 563 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 RPS4Y2Q8TD47 263 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 SFXN3Q9BWM7 321 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 NXF2Q9GZY0 626 aaKnown RBP14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 OPN3Q9H1Y3 402 aaPredicted RBP14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 CRNNQ9UBG3 495 aaPredicted RBP14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 GNG8Q9UK08 70 aa14.47□□□□□ -0.09
PDLIM1-201ENST00000329399 A0A075B6Q4 140 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 OR6C65A6NJZ3 312 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 FAM171A2A8MVW0 826 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 CFL1P23528 166 aaKnown RBP14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 CD79BP40259 229 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 ASCL1P50553 236 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 RORCP51449 518 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 ADAM8P78325 824 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 C10orf128Q5T292 105 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 ABLIM2Q6H8Q1 611 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 SLC25A47Q6Q0C1 308 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 DPY19L4Q7Z388 723 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 TPRA1Q86W33 373 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 CROCCP3Q8IVE0 287 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF679Q8IYX0 411 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 OR10H5Q8NGA6 315 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 TBC1D15Q8TC07 691 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 ABHD3Q8WU67 409 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 MROQ9BYG7 248 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 SLIRPQ9GZT3 109 aaKnown RBP14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 RERGLQ9H628 205 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 GLTPQ9NZD2 209 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 ST6GALNAC2Q9UJ37 374 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 ING1Q9UK53 422 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 COPS3Q9UNS2 423 aa14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 COA3Q9Y2R0 106 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-201ENST00000329399 OTOGQ6ZRI0 2925 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 TVP23AA6NH52 213 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 A8MXE2 369 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 CYTIPO60759 359 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 TMEM127O75204 238 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 DCTDP32321 178 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 CCR9P51686 369 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 CLDN17P56750 224 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 RPS25P62851 125 aaKnown RBP14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 RASGEF1BQ0VAM2 473 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 DOC2BQ14184 412 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 STK11Q15831 433 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 TP53I3Q53FA7 332 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 SSX6Q7RTT6 188 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF610Q8N9Z0 462 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 SYT14Q8NB59 555 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 MCFD2Q8NI22 146 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 RNASE6Q93091 150 aaKnown RBP14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 TMEM54Q969K7 222 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 ZFP3Q96NJ6 502 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 OR8B4Q96RC9 309 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 CDADC1Q9BWV3 514 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 B3GAT2Q9NPZ5 323 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 MRPL22Q9NWU5 206 aaKnown RBP14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 PEX16Q9Y5Y5 336 aa14.45□□□□□ -0.1
PDLIM1-201ENST00000329399 IGKV3D-15A0A087WSY6 115 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 TRBV2A0A0J9YWF9 115 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 ZNF814B7Z6K7 855 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 GABRPO00591 440 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 SMAD9O15198 467 aaKnown RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 SYNGR4O95473 234 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 EDNRAP25101 427 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 CSNK1A1P48729 337 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 MTNR1BP49286 362 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 LSM6P62312 80 aaKnown RBP14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 FABP5Q01469 135 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 FAM27E3Q08E93 113 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 YIF1BQ5BJH7 314 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 C22orf34Q6ZV56 151 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 YIPF7Q8N8F6 280 aa14.44□□□□□ -0.1
PDLIM1-201ENST00000329399 LINC01560Q8TB33 94 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms