RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SDR9C7Q8NEX9 313 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 OR52E2Q8NGJ4 325 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 TBCCD1Q9NVR7 557 aa23.61■■□□□ 1.37
ATPAF1-201ENST00000329231 BHLHE40O14503 412 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 CRLF1O75462 422 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 GPANK1O95872 356 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 TUBG1P23258 451 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 MPV17P39210 176 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 CCDC121Q6ZUS5 278 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 GJC3Q8NFK1 279 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 OR1F12Q8NHA8 337 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 IPCEF1Q8WWN9 437 aaPredicted RBP23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 DGCR6LQ9BY27 220 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 CHODLQ9H9P2 273 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 TUBG2Q9NRH3 451 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 NKIRAS2Q9NYR9 191 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 ATPIF1Q9UII2 106 aa23.6■■□□□ 1.37
ATPAF1-201ENST00000329231 CHD3Q12873 2000 aaKnown RBP23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 OR6C68A6NDL8 312 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 OR6C6A6NF89 314 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 RER1O15258 196 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 CST1P01037 141 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 ACHEP22303 614 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 MAGEB1P43366 347 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 CHN2P52757 468 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 MEP1BQ16820 701 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 SLC36A3Q495N2 470 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 CCDC92Q53HC0 331 aaPredicted RBP23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 NPEPL1Q8NDH3 523 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 SLC26A10Q8NG04 563 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 PLA2G12AQ9BZM1 189 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 YY1AP1Q9H869 796 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 TBC1D23Q9NUY8 699 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 GRIP1Q9Y3R0 1128 aa23.59■■□□□ 1.37
ATPAF1-201ENST00000329231 PLSCR5A0PG75 271 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 NCR1O76036 304 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 TACSTD2P09758 323 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 COL8A2P25067 703 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 CBX1P83916 185 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 TEKQ02763 1124 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 OR10G2Q8NGC3 310 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 COG8Q96MW5 612 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 CYSLTR2Q9NS75 346 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 CGGBP1Q9UFW8 167 aaPredicted RBP23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 LHFPL6Q9Y693 200 aa23.58■■□□□ 1.37
ATPAF1-201ENST00000329231 EBAG9O00559 213 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 LIPAP38571 399 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 ZNF81P51508 661 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 CCL8P80075 99 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 ASRGL1Q7L266 308 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 LNX2Q8N448 690 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 PAPD5Q8NDF8 572 aaKnown RBP23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 OR8D4Q8NGM9 314 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 DCLRE1CQ96SD1 692 aaKnown RBP23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 TSSK6Q9BXA6 273 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 HDHD2Q9H0R4 259 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 FN3KQ9H479 309 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 DECR2Q9NUI1 292 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 BAIAP2Q9UQB8 552 aa23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 SONP18583 2426 aaKnown RBP23.57■■□□□ 1.36
ATPAF1-201ENST00000329231 YLPM1P49750 1951 aaKnown RBP23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 GNGT2O14610 69 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 LILRA1O75019 489 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 FKBP6O75344 327 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 HLA-DQA2P01906 255 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 TFP02787 698 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 ZNF16P17020 682 aaPredicted RBP23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 MMP15P51511 669 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 TMEM33P57088 247 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 HIST1H3AP68431 136 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 COX10Q12887 443 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 HIST2H3PS2Q5TEC6 136 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 HIST2H3AQ71DI3 136 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 GIPC3Q8TF64 312 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 SLC7A6Q92536 515 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 HPS1Q92902 700 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 CDADC1Q9BWV3 514 aa23.56■■□□□ 1.36
ATPAF1-201ENST00000329231 LRP5LA4QPB2 252 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 TPD52L2O43399 206 aaKnown RBP23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 GPR6P46095 362 aaPredicted RBP23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 ERFP50548 548 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 ZMAT1Q5H9K5 638 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 C1orf146Q5VVC0 180 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 CORO6Q6QEF8 472 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 CD300LDQ6UXZ3 194 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 OR2T33Q8NG76 320 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 OR2AJ1Q8NGZ0 328 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 OR2T4Q8NH00 348 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 GTF3AQ92664 365 aaKnown RBP23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 YIPF5Q969M3 257 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 SLCO4A1Q96BD0 722 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 DDOQ99489 341 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 COQ7Q99807 217 aa23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 ZNF275Q9NSD4 429 aaPredicted RBP23.55■■□□□ 1.36
ATPAF1-201ENST00000329231 ARRDC5A6NEK1 342 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 J3QW42 95 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 SOX14O95416 240 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 RGS6P49758 472 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms