RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SELENOFO60613 162 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SLCO2B1O94956 709 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF728P0DKX0 622 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 HOXC13P31276 330 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 POLR2HP52434 150 aaKnown RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 RPS21P63220 83 aaKnown RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ERV3-1Q14264 604 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF79Q15937 498 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SLC25A35Q3KQZ1 300 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 VITQ6UXI7 678 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 TMPRSS7Q7RTY8 843 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PRICKLE2Q7Z3G6 844 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF429Q86V71 674 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 MUC20Q8N307 709 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OR4F5Q8NH21 305 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OR4F4Q96R69 305 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 WWTR1Q9GZV5 400 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 GJE1A6NN92 205 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 PPM1DO15297 605 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 PDLIM3Q53GG5 364 aaPredicted RBP6.46□□□□□ -1.37
SMC1A-201ENST00000322213 AWAT1Q58HT5 328 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 FAHD2BQ6P2I3 314 aaPredicted RBP6.46□□□□□ -1.37
SMC1A-201ENST00000322213 CPXM2Q8N436 756 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 FAHD2AQ96GK7 314 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 SMIM7Q9BQ49 75 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 TEX101Q9BY14 249 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 CPEB1Q9BZB8 566 aaKnown RBP6.46□□□□□ -1.37
SMC1A-201ENST00000322213 PRO1933Q9H354 126 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 CXorf36Q9H7Y0 433 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 METTL7AQ9H8H3 244 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 A0A1B0GV90 55 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 ANTXRLA6NF34 631 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM88BA6NKF7 163 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 STC2O76061 302 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 SBK3P0C264 359 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF28P17035 718 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 TRHRP34981 398 aaPredicted RBP6.46□□□□□ -1.37
SMC1A-201ENST00000322213 PJVKQ0ZLH3 352 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 IER5LQ5T953 404 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 MOB1BQ7L9L4 216 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM229BQ8NBD8 167 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 P2RY12Q9H244 342 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 GAL3ST2Q9H3Q3 398 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 KCNIP1Q9NZI2 227 aa6.46□□□□□ -1.37
SMC1A-201ENST00000322213 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 TP53I11O14683 189 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 GPR37O15354 613 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 OR8G3PP0DMU2 310 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 APEHP13798 732 aaKnown RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 CPMP14384 443 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 EFNA3P52797 238 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 DLK1P80370 383 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 UEVLDQ8IX04 471 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 NECAP1Q8NC96 275 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 RSRP1Q9BUV0 290 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 ZMAT3Q9HA38 289 aaKnown RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 FTSJ1Q9UET6 329 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 TMEM269A0A1B0GVZ9 245 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 OR52A4PA6NMU1 304 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 F6UZH7 168 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 CST4P01036 141 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 SELPP16109 830 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 ADRA2CP18825 462 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 KITLGP21583 273 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 DTYMKP23919 212 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 ATP1B3P54709 279 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 CCL23P55773 120 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 RPS18P62269 152 aaKnown RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 ACVR1Q04771 509 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 PNPLA1Q8N8W4 532 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 FAM210BQ96KR6 192 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 RIF1Q5UIP0 2472 aaKnown RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 MFNGO00587 321 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 DUS4LO95620 317 aaKnown RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 TACR1P25103 407 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 LMAN2Q12907 356 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 SYS1Q8N2H4 156 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 SDSLQ96GA7 329 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 CMC2Q9NRP2 79 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 B3GALT5Q9Y2C3 310 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 A8MXK9 166 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 PNRC1Q12796 327 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 IHHQ14623 411 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 Q6ZVL8 140 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 RHOVQ96L33 236 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 TAAR9Q96RI9 348 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 GGACTQ9BVM4 153 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 OPN3Q9H1Y3 402 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 ESRP2Q9H6T0 727 aaKnown RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 TP53TG5Q9Y2B4 290 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 A0A0U1RQF3 1178 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 PHF1O43189 567 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-201ENST00000322213 CIDEAO60543 219 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 TXNDC8Q6A555 127 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 GCNT2Q8N0V5 402 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 EXD3Q8N9H8 876 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 DERL3Q96Q80 235 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF727A8MUV8 499 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms