RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 LRRC75A-AS1Q8N1F1 130 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PAQR4Q8N4S7 273 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OR1J1Q8NGS3 322 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OR1F12Q8NHA8 337 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ABHD4Q8TB40 342 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 MRPL24Q96A35 216 aaKnown RBP9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 COG8Q96MW5 612 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DCLRE1CQ96SD1 692 aaKnown RBP9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 COQ7Q99807 217 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HCAR1Q9BXC0 346 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CACNG6Q9BXT2 260 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GSX2Q9BZM3 304 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DYNLRB1Q9NP97 96 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 IMPAD1Q9NX62 359 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CYB5R1Q9UHQ9 305 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HRNRQ86YZ3 2850 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 FBN2P35556 2912 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DCHS2Q6V1P9 2916 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ARID1AO14497 2285 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 LOC100509620A0A075B734 347 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 A0A1W2PPW3 197 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF593O00488 134 aaPredicted RBP9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TLX2O43763 284 aaPredicted RBP9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PRKYO43930 277 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GCH1P30793 250 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GGT2P36268 569 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RPS27P42677 84 aaKnown RBP9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RGS6P49758 472 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ECH1Q13011 328 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 APOFQ13790 326 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 EIF2B1Q14232 305 aaKnown RBP9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TAF13Q15543 124 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TRIP10Q15642 601 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF718Q3SXZ3 478 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZIK1Q3SY52 487 aaPredicted RBP9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 C11orf71Q6IPW1 123 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CFAP77Q6ZQR2 320 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DCXRQ7Z4W1 244 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TCEANCQ8N8B7 351 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF511Q8NB15 262 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 FAM81AQ8TBF8 368 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TMEM163Q8TC26 289 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNRF4Q8WWF5 429 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 IPCEF1Q8WWN9 437 aaPredicted RBP9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZMYND19Q96E35 227 aaPredicted RBP9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 C4orf45Q96LM5 186 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ATF6BQ99941 703 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SYT3Q9BQG1 590 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 COPS4Q9BT78 406 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 WDR76Q9H967 626 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 BARX1Q9HBU1 254 aaPredicted RBP9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 C8orf4Q9NR00 106 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GPR160Q9UJ42 338 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GRIP1Q9Y3R0 1128 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RTTNQ86VV8 2226 aa9.48□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 APCP25054 2843 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PRRC2AP48634 2157 aaKnown RBP9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SETXQ7Z333 2677 aaKnown RBP9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SLC22A31A6NKX4 558 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF878C9JN71 531 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 H3BSA7 217 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 H7C417 338 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 J3QW42 95 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 M0R129 80 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 M0R233 179 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OVOL3O00110 214 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CD8AP01732 235 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HSD11B1P28845 292 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 EPHA2P29317 976 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 WNT5AP41221 380 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 EVX1P49640 407 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PPOXP50336 477 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 KLF3P57682 345 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ERVS71-1P61550 626 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PPP1CBP62140 327 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HIST1H3AP68431 136 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TEX30Q5JUR7 227 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 Q5PR19 223 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HIST2H3PS2Q5TEC6 136 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 LINC01590Q5TEZ4 76 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 NXNL2Q5VZ03 156 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SHEQ5VZ18 495 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RFPL4BQ6ZWI9 263 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HIST2H3AQ71DI3 136 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DPY19L4Q7Z388 723 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF101Q8IZC7 436 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF555Q8NEP9 628 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 BBS1Q8NFJ9 593 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SYNPRQ8TBG9 265 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SNX33Q8WV41 574 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 IGFBPL1Q8WX77 278 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PTP4A1Q93096 173 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SPTSSAQ969W0 71 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 IL4I1Q96RQ9 567 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 VRK1Q99986 396 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 MRPL37Q9BZE1 423 aaKnown RBP9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 VCXQ9H320 206 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TOR3AQ9H497 397 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF701Q9NV72 531 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DUSP13Q9UII6 198 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms