RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 MEIKINA0A087WXM9 373 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 PVALBP20472 110 aaPredicted RBP12.7□□□□□ -0.38
SDC2-201ENST00000302190 YPEL5P62699 121 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 PMPCAQ10713 525 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 ZNF74Q16587 644 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 FAM57BQ71RH2 274 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 HAVCR1Q96D42 359 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 SCMH1Q96GD3 660 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 GPR137Q96N19 417 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 ZNF768Q9H5H4 540 aaKnown RBP12.7□□□□□ -0.38
SDC2-201ENST00000302190 MMP25Q9NPA2 562 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 ALKBH4Q9NXW9 302 aa12.7□□□□□ -0.38
SDC2-201ENST00000302190 MDC1Q14676 2089 aaKnown RBP12.69□□□□□ -0.38
SDC2-201ENST00000302190 LOC100289279A0A1B0GTE1 492 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 ERGP11308 486 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 GABRG2P18507 467 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 CRABP1P29762 137 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 HNRNPKP61978 463 aaKnown RBP eCLIP12.69□□□□□ -0.383e-6■■□□□ 12.9
SDC2-201ENST00000302190 FAM76BQ5HYJ3 339 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 C1orf140Q5VVS0 124 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 ANGPTL5Q86XS5 388 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 GABRG1Q8N1C3 465 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 OR51T1Q8NGJ9 327 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 POMT2Q9UKY4 750 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 MOKQ9UQ07 419 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 B3GALT1Q9Y5Z6 326 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 CACNA1DQ01668 2161 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 SNRNP200O75643 2136 aaKnown RBP12.69□□□□□ -0.38
SDC2-201ENST00000302190 IGHV5-51A0A0C4DH38 117 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 DUX1O43812 170 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 AGTR1P30556 359 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 RBMXP38159 391 aaKnown RBP12.69□□□□□ -0.38
SDC2-201ENST00000302190 RNLSQ5VYX0 342 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 LANCL3Q6ZV70 420 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 RTL10Q7L3V2 364 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 OR51A2Q8NGJ7 313 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 OR1J2Q8NGS2 313 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 NT5CQ8TCD5 201 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 PGLYRP3Q96LB9 341 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 MENTQ9BUN1 341 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 ABHD6Q9BV23 337 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 UBE2ZQ9H832 354 aaPredicted RBP12.69□□□□□ -0.38
SDC2-201ENST00000302190 ANKRD10Q9NXR5 420 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 GPN3Q9UHW5 284 aaPredicted RBP12.69□□□□□ -0.38
SDC2-201ENST00000302190 FOXJ3Q9UPW0 622 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
SDC2-201ENST00000302190 ACAA2P42765 397 aaKnown RBP12.69□□□□□ -0.38
SDC2-201ENST00000302190 HAVCR2Q8TDQ0 301 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 CD300LFQ8TDQ1 290 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 NPAS1Q99742 590 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 ZNF700Q9H0M5 742 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 PCDHGA5Q9Y5G8 931 aa12.69□□□□□ -0.38
SDC2-201ENST00000302190 FREM2Q5SZK8 3169 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 ZNF850A8MQ14 1090 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 METTL12A8MUP2 240 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 ZNF749O43361 778 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 OR2T1O43869 369 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 ERCC1P07992 297 aaPredicted RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 GNB3P16520 340 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 RPS15P62841 145 aaKnown RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 TMEM176BQ3YBM2 270 aaPredicted RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 FIP1L1Q6UN15 594 aaKnown RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 NPSR1Q6W5P4 371 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 GVQW1Q8N7I0 195 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 OR5H2Q8NGV7 314 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 CCDC74AQ96AQ1 378 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 LDAHQ9H6V9 325 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 PRR13Q9NZ81 148 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 ST6GALNAC2Q9UJ37 374 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 OR52A1Q9UKL2 312 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 RNF215Q9Y6U7 377 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 PLXND1Q9Y4D7 1925 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 FREM3P0C091 2139 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 TRAV36DV7A0A075B6V5 113 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 LINC00587B1AMM8 73 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 TMEM255AQ5JRV8 349 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 STOML3Q8TAV4 291 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 AMELYQ99218 206 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 CRB3Q9BUF7 120 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 TAS2R5Q9NYW4 299 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 RIF1Q5UIP0 2472 aaKnown RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 TRBV11-1A0A0K0K1C0 115 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 STK17BO94768 372 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 KIR2DL1P43626 348 aaPredicted RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 HOXA1P49639 335 aaPredicted RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 EPHA4P54764 986 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 CLDN6P56747 220 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 KIAA0895LQ68EN5 471 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 GLDNQ6ZMI3 551 aaPredicted RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 NANPQ8TBE9 248 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 ZC3HAV1LQ96H79 300 aaKnown RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 CHRNA9Q9UGM1 479 aa12.68□□□□□ -0.38
SDC2-201ENST00000302190 ZNF223Q9UK11 482 aaPredicted RBP12.68□□□□□ -0.38
SDC2-201ENST00000302190 A0A1B0GUH1 482 aa12.67□□□□□ -0.38
SDC2-201ENST00000302190 MEGF11A6BM72 1044 aa12.67□□□□□ -0.38
SDC2-201ENST00000302190 OR5H14A6NHG9 310 aa12.67□□□□□ -0.38
SDC2-201ENST00000302190 H0YIG0 161 aa12.67□□□□□ -0.38
SDC2-201ENST00000302190 PHYHO14832 338 aa12.67□□□□□ -0.38
SDC2-201ENST00000302190 PIN1P1O15428 100 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms