RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 MMP15P51511 669 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 HTRA3P83110 453 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 DCAF12Q5T6F0 453 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 GLIPR1L1Q6UWM5 242 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 RAB24Q969Q5 203 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 PADI1Q9ULC6 663 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 TMED7Q9Y3B3 224 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 BCL2L11O43521 198 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 OR2J3O76001 311 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 NTF3P20783 257 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 DCDP81605 110 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ALKBH1Q13686 389 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SOWAHCQ53LP3 525 aaPredicted RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 LRRTM3Q86VH5 581 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 FAM216AQ8WUB2 273 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 PIGTQ969N2 578 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SHISA4Q96DD7 197 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 LRRC3BQ96PB8 259 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 CLEC2DQ9UHP7 191 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 CSN1S1P47710 185 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 PTTG1IPP53801 180 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 CLDN10P78369 228 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SLC39A5Q6ZMH5 540 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 EXD3Q8N9H8 876 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 DDOQ99489 341 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 NIPSNAP1Q9BPW8 284 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 DNMT3BQ9UBC3 853 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 BOLA1Q9Y3E2 137 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 TMEM129A0AVI4 362 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ZC3H12DA2A288 527 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 H2AFB1P0C5Y9 115 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 CR2P20023 1033 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 APEX1P27695 318 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 C19orf57Q0VDD7 668 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SEMA3BQ13214 749 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 WDR74Q6RFH5 385 aaPredicted RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 C17orf99Q6UX52 265 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 AAED1Q7RTV5 226 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SPICQ8N5J4 248 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ATP5SQ99766 215 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 DUSP13Q9UII6 198 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 TJP1Q07157 1748 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 AQP7P3A6NL99 342 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 DRGXA6NNA5 263 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 CLEC2LP0C7M8 214 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 PTHLHP12272 177 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 WNT7BP56706 349 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ZNF750Q32MQ0 723 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 GGTA1PQ4G0N0 100 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 UBALD2Q8IYN6 164 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SLC39A11Q8N1S5 342 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 EXTL1Q92935 676 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ISG20Q96AZ6 181 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ATG101Q9BSB4 218 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SLC2A8Q9NY64 477 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 BET1LQ9NYM9 111 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 PPP1R3CQ9UQK1 317 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 TRAPPC4Q9Y296 219 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 KIF13BQ9NQT8 1826 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 OR2A25A4D2G3 310 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ACSM4P0C7M7 580 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ADRA1AP35348 466 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 BCL6P41182 706 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SLC6A11P48066 632 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 GABREP78334 506 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 KCNJ10P78508 379 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 NTHL1P78549 312 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 KHDC1LQ5JSQ8 128 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 COL5A1-AS1Q5SY13 56 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 TOMM20LQ6UXN7 152 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 LRP10Q7Z4F1 713 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 OR5AS1Q8N127 324 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 LGI3Q8N145 548 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SLC35B4Q969S0 331 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ZC3HAV1LQ96H79 300 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 MMP24Q9Y5R2 645 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 DNPH1O43598 174 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 BTF3P20290 206 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 FOXK2Q01167 660 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 CTBSQ01459 385 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 C5orf46Q6UWT4 87 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 C15orf39Q6ZRI6 1047 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 GDPD3Q7L5L3 318 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 OR10X1Q8NGY0 326 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 UBTD2Q8WUN7 234 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 AKR1E2Q96JD6 320 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 OR6C1Q96RD1 312 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 PIGQQ9BRB3 760 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SOX7Q9BT81 388 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 SPNS1Q9H2V7 528 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ECM29Q5VYK3 1845 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ICE1Q9Y2F5 2266 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 GPR171O14626 319 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 UQCRFS1P47985 274 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 HNRNPA1L2Q32P51 320 aaKnown RBP5.1□□□□□ -1.59
CPSF2-201ENST00000298875 ACOT7LQ6ZUV0 252 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 DCXRQ7Z4W1 244 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 OR5M1Q8NGP8 315 aa5.1□□□□□ -1.59
CPSF2-201ENST00000298875 TMEM40Q8WWA1 233 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms