RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 GABRA5P31644 462 aa21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 DCTDP32321 178 aa21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 RIDAP52758 137 aaKnown RBP21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 CCDC92Q53HC0 331 aaPredicted RBP21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 CD200R1LQ6Q8B3 271 aa21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 KLHL24Q6TFL4 600 aa21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 Q6ZT83 130 aa21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 HSD17B8Q92506 261 aa21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 CENPMQ9NSP4 180 aa21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 TINAGQ9UJW2 476 aa21.59■■□□□ 1.05
GTF2A1-201ENST00000298173 AIREO43918 545 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 RPS25P62851 125 aaKnown RBP21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 C9orf135Q5VTT2 229 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 OR7E24Q6IFN5 339 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 ST6GALNAC3Q8NDV1 305 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 FGFBP3Q8TAT2 258 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 SMIM19Q96E16 107 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 CNTNAP3BQ96NU0 1288 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 CNTNAP3Q9BZ76 1288 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 DDX28Q9NUL7 540 aaKnown RBP21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 ZNF224Q9NZL3 707 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 FRRS1LQ9P0K9 344 aa21.58■■□□□ 1.05
GTF2A1-201ENST00000298173 ZNF878C9JN71 531 aa21.57■■□□□ 1.04
GTF2A1-201ENST00000298173 PNPP00491 289 aa21.57■■□□□ 1.04
GTF2A1-201ENST00000298173 SH3BGRP55822 239 aaPredicted RBP21.57■■□□□ 1.04
GTF2A1-201ENST00000298173 ARL9Q6T311 187 aa21.57■■□□□ 1.04
GTF2A1-201ENST00000298173 GDPGP1Q6ZNW5 385 aa21.57■■□□□ 1.04
GTF2A1-201ENST00000298173 FBXL3Q9UKT7 428 aa21.57■■□□□ 1.04
GTF2A1-201ENST00000298173 STUB1Q9UNE7 303 aa21.57■■□□□ 1.04
GTF2A1-201ENST00000298173 TRBV2A0A0J9YWF9 115 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 FARS2O95363 451 aaKnown RBP21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 MMP7P09237 267 aaPredicted RBP21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 H2BFMP0C1H6 154 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 CTSSP25774 331 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 ALKBH1Q13686 389 aaKnown RBP21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 TIMM50Q3ZCQ8 353 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 SLC16A14Q7RTX9 510 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 OR1K1Q8NGR3 316 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 OR2G2Q8NGZ5 317 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 GHSRQ92847 366 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 TMEM203Q969S6 136 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 NBEAQ8NFP9 2946 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 ATE1O95260 518 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 CD8BP10966 210 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 ZNF32P17041 273 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 IGHV1-2P23083 117 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 SLC3A1Q07837 685 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 CNPY1Q3B7I2 92 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 SOWAHCQ53LP3 525 aaPredicted RBP21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 PRSS35Q8N3Z0 413 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 BCL2L2Q92843 193 aaPredicted RBP21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 TRMT61AQ96FX7 289 aaKnown RBP21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 BOD1Q96IK1 185 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 CHCHD6Q9BRQ6 235 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 PROCRQ9UNN8 238 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 TIMM10BQ9Y5J6 103 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 RTTNQ86VV8 2226 aa21.56■■□□□ 1.04
GTF2A1-201ENST00000298173 RP1L1Q8IWN7 2480 aaPredicted RBP21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 PATE4P0C8F1 98 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 GDI2P50395 445 aaKnown RBP21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 MMP16P51512 607 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 CCR9P51686 369 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 PCBD1P61457 104 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 FABP5Q01469 135 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 RSPO1Q2MKA7 263 aaPredicted RBP21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 ELFN2Q5R3F8 820 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 ANKRD16Q6P6B7 361 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 GABRG1Q8N1C3 465 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 ZNF610Q8N9Z0 462 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 CENPOQ9BU64 300 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 SFXN3Q9BWM7 321 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 NIPAL2Q9H841 368 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 SLC5A6Q9Y289 635 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 R4GMQ9 66 aa21.55■■□□□ 1.04
GTF2A1-201ENST00000298173 USP24Q9UPU5 2620 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 POLEQ07864 2286 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 A0A096LPE4 126 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 TRDV1A0A1B0GX56 115 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 A0A1W2PPZ6 126 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 OR4C45A6NMZ5 311 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 ZFPL1O95159 310 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 GALP22466 123 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 LSM3P62310 102 aaKnown RBP21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 PSG4Q00888 419 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 SCRN3Q0VDG4 424 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 PMPCAQ10713 525 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 IL17RDQ8NFM7 739 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 C4orf45Q96LM5 186 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 TMED9Q9BVK6 235 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 KCNN2Q9H2S1 579 aa21.54■■□□□ 1.04
GTF2A1-201ENST00000298173 SYNGR3O43761 229 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 NOL3O60936 208 aaKnown RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 SC5DO75845 299 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 HLA-DPB1P04440 258 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 COX5AP20674 150 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 FGF9P31371 208 aaPredicted RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 VBP1P61758 197 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 NCS1P62166 190 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 RPS11P62280 158 aaKnown RBP eCLIP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms