RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ABCB9Q9NP78 766 aa20.14■□□□□ 0.81
PTX3-201ENST00000295927 URB1O60287 2271 aaKnown RBP20.13■□□□□ 0.81
PTX3-201ENST00000295927 ZNF724A8MTY0 619 aa20.13■□□□□ 0.81
PTX3-201ENST00000295927 TAF4O00268 1085 aa20.13■□□□□ 0.81
PTX3-201ENST00000295927 CFL1P23528 166 aaKnown RBP20.13■□□□□ 0.81
PTX3-201ENST00000295927 MAPK3P27361 379 aaPredicted RBP20.13■□□□□ 0.81
PTX3-201ENST00000295927 ETV6P41212 452 aa20.13■□□□□ 0.81
PTX3-201ENST00000295927 MMP16P51512 607 aa20.13■□□□□ 0.81
PTX3-201ENST00000295927 FAM27BQ5VT28 67 aa20.13■□□□□ 0.81
PTX3-201ENST00000295927 GPR35Q9HC97 309 aa20.13■□□□□ 0.81
PTX3-201ENST00000295927 PARPBPQ9NWS1 579 aa20.13■□□□□ 0.81
PTX3-201ENST00000295927 NPR2P20594 1047 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 EIF2S3P41091 472 aaKnown RBP20.12■□□□□ 0.81
PTX3-201ENST00000295927 ZNF45Q02386 682 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 TAF13Q15543 124 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 CEP78Q5JTW2 689 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 IDNKQ5T6J7 187 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 TSPO2Q5TGU0 170 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 SFXN4Q6P4A7 337 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 PARP16Q8N5Y8 322 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 WDFY2Q96P53 400 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 TAAR6Q96RI8 345 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 SLCO5A1Q9H2Y9 848 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 TMEM38BQ9NVV0 291 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 FAM206AQ9NX38 181 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 COMMD3Q9UBI1 195 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 A0A1B0GVC2 190 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 K7EM74 188 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 YES1P07947 543 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 CEACAM16Q2WEN9 425 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 SPANXN2Q5MJ10 180 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 DDI2Q5TDH0 399 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 Q6ZS92 163 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 MCEMP1Q8IX19 187 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 GJC3Q8NFK1 279 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 PRDM14Q9GZV8 571 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 SLC25A18Q9H1K4 315 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 PALMDQ9NP74 551 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 BRD7Q9NPI1 651 aa20.12■□□□□ 0.81
PTX3-201ENST00000295927 TRBV5-7A0A0A0MS05 114 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 DOK2O60496 412 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 TGM6O95932 706 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 IGHV3-9P01782 118 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 HSD11B1P28845 292 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 PPP5CP53041 499 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 HIST1H3AP68431 136 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 SLC25A35Q3KQZ1 300 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 HIST2H3PS2Q5TEC6 136 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 HIST2H3AQ71DI3 136 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 TSEN15Q8WW01 171 aaKnown RBP20.11■□□□□ 0.81
PTX3-201ENST00000295927 SLC30A2Q9BRI3 323 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 LINC00470Q9BZP3 86 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 NIPAL2Q9H841 368 aa20.11■□□□□ 0.81
PTX3-201ENST00000295927 AK6Q9Y3D8 172 aaKnown RBP20.11■□□□□ 0.81
PTX3-201ENST00000295927 SLC22A20A6NK97 555 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 AQP7O14520 342 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 KRT33AO76009 404 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 CD40LGP29965 261 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 BCL2L15Q5TBC7 163 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 SIAH3Q8IW03 269 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 TMEM106AQ96A25 262 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 FBXO17Q96EF6 278 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 FOXB1Q99853 325 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 SLC7A10Q9NS82 523 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 DAPK2Q9UIK4 370 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 FREM1Q5H8C1 2179 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 RAF1P04049 648 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 PRKXP51817 358 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 MZT2AQ6P582 158 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 ZNF704Q6ZNC4 412 aaPredicted RBP20.1■□□□□ 0.81
PTX3-201ENST00000295927 RBMXL3Q8N7X1 1067 aaKnown RBP20.1■□□□□ 0.81
PTX3-201ENST00000295927 ACOT12Q8WYK0 555 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 SH3GL3Q99963 347 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 DDX28Q9NUL7 540 aaKnown RBP20.1■□□□□ 0.81
PTX3-201ENST00000295927 ZNF175Q9Y473 711 aa20.1■□□□□ 0.81
PTX3-201ENST00000295927 ACACAQ13085 2346 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 CEP295Q9C0D2 2601 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 ANKRD61A6NGH8 418 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 NOTOA8MTQ0 251 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 ZNHIT1O43257 154 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 ISG15P05161 165 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 B4GALT1P15291 398 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 THBS2P35442 1172 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 PSMA6P60900 246 aaKnown RBP20.09■□□□□ 0.81
PTX3-201ENST00000295927 THRSPQ92748 146 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 PBOV1Q9GZY1 135 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 ZCCHC4Q9H5U6 513 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 SLC5A6Q9Y289 635 aa20.09■□□□□ 0.81
PTX3-201ENST00000295927 MKRN2OSH3BPM6 223 aa20.08■□□□□ 0.81
PTX3-201ENST00000295927 CST2P09228 141 aa20.08■□□□□ 0.81
PTX3-201ENST00000295927 SLC2A2P11168 524 aaPredicted RBP20.08■□□□□ 0.81
PTX3-201ENST00000295927 GRB2P62993 217 aaKnown RBP20.08■□□□□ 0.81
PTX3-201ENST00000295927 PPP3R1P63098 170 aa20.08■□□□□ 0.81
PTX3-201ENST00000295927 CCDC92Q53HC0 331 aaPredicted RBP20.08■□□□□ 0.81
PTX3-201ENST00000295927 NUFIP2Q7Z417 695 aaKnown RBP20.08■□□□□ 0.81
PTX3-201ENST00000295927 SNX29P2Q8IUI4 249 aa20.08■□□□□ 0.81
PTX3-201ENST00000295927 KCTD12Q96CX2 325 aaKnown RBP20.08■□□□□ 0.81
PTX3-201ENST00000295927 GFI1Q99684 422 aa20.08■□□□□ 0.81
PTX3-201ENST00000295927 TCF7L1Q9HCS4 588 aa20.08■□□□□ 0.81
PTX3-201ENST00000295927 PLSCR2Q9NRY7 297 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms