RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 HEYLQ9NQ87 328 aaPredicted RBP16.81■□□□□ 0.28
PCDH1-201ENST00000287008 BHLHE40O14503 412 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 HS3ST1O14792 307 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 CLDN1O95832 211 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 APOA2P02652 100 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 PCK2Q16822 640 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 TRILQ7L0X0 811 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 CCDC28AQ8IWP9 274 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 SYS1Q8N2H4 156 aa16.81■□□□□ 0.28
PCDH1-201ENST00000287008 SHROOM3Q8TF72 1996 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 ZC3H12DA2A288 527 aaKnown RBP16.8■□□□□ 0.28
PCDH1-201ENST00000287008 CHRNB1P11230 501 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 GK2Q14410 553 aaPredicted RBP16.8■□□□□ 0.28
PCDH1-201ENST00000287008 STEAP3Q658P3 488 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 ZNF529Q6P280 563 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 OGFOD3Q6PK18 319 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 PLEKHF2Q9H8W4 249 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 SLCO1B1Q9Y6L6 691 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 A8MXE2 369 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 K7EPK0 472 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 SULT1B1O43704 296 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 MED6O75586 246 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 NRASP01111 189 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 LIPAP38571 399 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 FAM71E2Q8N5Q1 922 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 SLCO4A1Q96BD0 722 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 SIGLEC11Q96RL6 698 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 ZCCHC4Q9H5U6 513 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 SIAEQ9HAT2 523 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 A0A087WUJ7 227 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 CELA2BP08218 269 aaPredicted RBP16.8■□□□□ 0.28
PCDH1-201ENST00000287008 GLRA1P23415 457 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 HBG1P69891 147 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 HBG2P69892 147 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 C9orf152Q5JTZ5 239 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 SHEQ5VZ18 495 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 NLRC3Q7RTR2 1065 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 SFTPA1Q8IWL2 248 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 BATF2Q8N1L9 274 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 ZFP64Q9NPA5 681 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 NECAP2Q9NVZ3 263 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 A0A1B0GTQ1 180 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 FITM1A5D6W6 292 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 PHF1O43189 567 aaPredicted RBP16.8■□□□□ 0.28
PCDH1-201ENST00000287008 GLAP06280 429 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 CLEC2LP0C7M8 214 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 AKR1C1Q04828 323 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 RHBDD2Q6NTF9 364 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 OR4C3Q8NH37 302 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 EID2BQ96D98 161 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 RBMXL1Q96E39 390 aaKnown RBP16.8■□□□□ 0.28
PCDH1-201ENST00000287008 GNRHR2Q96P88 292 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 JAM3Q9BX67 310 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 RBFOX1Q9NWB1 397 aaKnown RBP16.8■□□□□ 0.28
PCDH1-201ENST00000287008 QPCTLQ9NXS2 382 aa16.8■□□□□ 0.28
PCDH1-201ENST00000287008 SH2D1BO14796 132 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 GABARAPO95166 117 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 TFAP2EQ6VUC0 442 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 NOXA1Q86UR1 476 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 OR52N5Q8NH56 324 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 RDH5Q92781 318 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 ITPKCQ96DU7 683 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 TAS2R4Q9NYW5 299 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 THSD7AQ9UPZ6 1657 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 CACNA1EQ15878 2313 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 CROCCQ5TZA2 2017 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 STRCP1A6NGW2 1772 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 BCORQ6W2J9 1755 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 CNIH1O95406 144 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 CTXN2P0C2S0 81 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 OMGP23515 440 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 HTR2BP41595 481 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 KIR2DL1P43626 348 aaPredicted RBP16.79■□□□□ 0.28
PCDH1-201ENST00000287008 KCNJ8Q15842 424 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 OR2L13Q8N349 312 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 OR10G3Q8NGC4 313 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 GIMAP1Q8WWP7 306 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 SLC25A21Q9BQT8 299 aaPredicted RBP16.79■□□□□ 0.28
PCDH1-201ENST00000287008 F8W036 122 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 SLC35A2P78381 396 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 GPR119Q8TDV5 335 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 SHARPINQ9H0F6 387 aa16.79■□□□□ 0.28
PCDH1-201ENST00000287008 LRP5LA4QPB2 252 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 ECI1P42126 302 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 RAB11AP62491 216 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 NKG7Q16617 165 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 HEPHL1Q6MZM0 1159 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 JMJD6Q6NYC1 403 aaPredicted RBP16.78■□□□□ 0.28
PCDH1-201ENST00000287008 GALNT16Q8N428 558 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 OR10J5Q8NHC4 309 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 HCCSP53701 268 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 PWWP2BQ6NUJ5 590 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 BBS1Q8NFJ9 593 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 LGALS8O00214 317 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 ABCD4O14678 606 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 SULT1C4O75897 302 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 EGR3Q06889 387 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 PRSS41Q7RTY9 318 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 NRARPQ7Z6K4 114 aa16.78■□□□□ 0.28
PCDH1-201ENST00000287008 ST7LQ8TDW4 575 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms