RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 TNK1Q13470 666 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 KLF9Q13886 244 aaPredicted RBP10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 MFSD13AQ14CX5 517 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 TRAPPC6BQ86SZ2 158 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 YRDCQ86U90 279 aaKnown RBP10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 OR14L1PQ8NHC6 308 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 SOSTQ9BQB4 213 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 MRPL22Q9NWU5 206 aaKnown RBP10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 CACNA1HO95180 2353 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 LAMA1P25391 3075 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 NAP1L6A6NFF2 107 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 TSPAN4O14817 238 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 NUPL2O15504 423 aaKnown RBP10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 ZNHIT1O43257 154 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 ZNF208O43345 1280 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 OPCMLQ14982 345 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 RBMS2Q15434 407 aaKnown RBP10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 AKIRIN2Q53H80 203 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 TMEM81Q6P7N7 255 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 TRILQ7L0X0 811 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 ZNF680Q8NEM1 530 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 ZC3HAV1LQ96H79 300 aaKnown RBP10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 UBL7Q96S82 380 aaPredicted RBP10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 DUSP23Q9BVJ7 150 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 C1QTNF6Q9BXI9 259 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 NMNAT2Q9BZQ4 307 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 ZNF160Q9HCG1 818 aa10.63□□□□□ -0.71
SLC13A3-201ENST00000279027 CTAG2O75638 210 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 GLSO94925 669 aaPredicted RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 EPHA4P54764 986 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 RPS18P62269 152 aaKnown RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 RPS4XP62701 263 aaKnown RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 TEX19Q8NA77 164 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 CCDC107Q8WV48 283 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 ZNF471Q9BX82 626 aaPredicted RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 PRRG4Q9BZD6 226 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 CHST6Q9GZX3 395 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 IGKV1D-43A0A0B4J1Z2 117 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 TMEM272A0A1B0GTI8 110 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 F5H5P2 479 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 ALX3O95076 343 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 PMP2P02689 132 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 GNB3P16520 340 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 RAB3AP20336 220 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 BDKRB2P30411 391 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 ACTBP60709 375 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 ACTG1P63261 375 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 DYRK1AQ13627 763 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 GGTLC2Q14390 218 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 HACD4Q5VWC8 232 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 GVQW1Q8N7I0 195 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 GFI1Q99684 422 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 ADAM19Q9H013 955 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 TMEM82A0PJX8 343 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 SERPINA2P20848 420 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 GABRA4P48169 554 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 EFNA3P52797 238 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 RNF128Q8TEB7 428 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 RHBDD1Q8TEB9 315 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 SLC39A7Q92504 469 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 PIGTQ969N2 578 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 MNTQ99583 582 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 POFUT1Q9H488 388 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 EXOSC3Q9NQT5 275 aaKnown RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 DLL4Q9NR61 685 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 CA10Q9NS85 328 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 TAS2R8Q9NYW2 309 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 PCDHGA5Q9Y5G8 931 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 SESN1Q9Y6P5 492 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 NSG1A0A0A6YYJ2 146 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 SHISA7A6NL88 538 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 DISC1C4P0D8 188 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 ZNF254O75437 659 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 HLA-AP01891 365 aaKnown RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 CD34P28906 385 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 APOBEC1P41238 236 aaKnown RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 CSNK1A1P48729 337 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 RHBDD2Q6NTF9 364 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 C3orf33Q6P1S2 294 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 CREB3L2Q70SY1 520 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 FAM219AQ8IW50 185 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 OR5D14Q8NGL3 314 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 WDR89Q96FK6 387 aaPredicted RBP10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 SCMH1Q96GD3 660 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 MAP6Q96JE9 813 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 SFXN2Q96NB2 322 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 SLC39A1Q9NY26 324 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 MYOTQ9UBF9 498 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 RHBDD3Q9Y3P4 386 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 ETV7Q9Y603 341 aa10.62□□□□□ -0.71
SLC13A3-201ENST00000279027 PCNX3Q9H6A9 2034 aa10.61□□□□□ -0.71
SLC13A3-201ENST00000279027 A0A1W2PQM1 296 aa10.61□□□□□ -0.71
SLC13A3-201ENST00000279027 MEGF11A6BM72 1044 aa10.61□□□□□ -0.71
SLC13A3-201ENST00000279027 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
SLC13A3-201ENST00000279027 XRCC3O43542 346 aa10.61□□□□□ -0.71
SLC13A3-201ENST00000279027 CLPSP04118 112 aa10.61□□□□□ -0.71
SLC13A3-201ENST00000279027 BTCP35070 178 aa10.61□□□□□ -0.71
SLC13A3-201ENST00000279027 EXOSC2Q13868 293 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms