RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 YIPF5Q969M3 257 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 PHF7Q9BWX1 381 aaPredicted RBP11.03□□□□□ -0.64
COL8A1-201ENST00000261037 PLEKHF2Q9H8W4 249 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 BCO1Q9HAY6 547 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 PDFQ9HBH1 243 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 TNFRSF10CO14798 259 aa11.02□□□□□ -0.64
COL8A1-201ENST00000261037 LAP3P28838 519 aa11.02□□□□□ -0.64
COL8A1-201ENST00000261037 RBP2P50120 134 aa11.02□□□□□ -0.64
COL8A1-201ENST00000261037 IL10RAQ13651 578 aa11.02□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF705AQ6ZN79 300 aaPredicted RBP11.02□□□□□ -0.64
COL8A1-201ENST00000261037 LGI3Q8N145 548 aa11.02□□□□□ -0.64
COL8A1-201ENST00000261037 C15orf54Q8N8G6 183 aa11.02□□□□□ -0.64
COL8A1-201ENST00000261037 ING1Q9UK53 422 aaPredicted RBP11.02□□□□□ -0.64
COL8A1-201ENST00000261037 CSAG2Q9Y5P2 127 aa11.02□□□□□ -0.64
COL8A1-201ENST00000261037 XRCC3O43542 346 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 APOA2P02652 100 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 HPNP05981 417 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 RPL18Q07020 188 aaKnown RBP11.02□□□□□ -0.65
COL8A1-201ENST00000261037 ZNF266Q14584 549 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM81Q6P7N7 255 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 DHRS4L2Q6PKH6 230 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 GPR119Q8TDV5 335 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 SLC25A37Q9NYZ2 338 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 PROCRQ9UNN8 238 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 GFYI3L273 518 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 SDCBPO00560 298 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-201ENST00000261037 FCMRO60667 390 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 NID1P14543 1247 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 SDHAP31040 664 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 S100A11P31949 105 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 RDH5Q92781 318 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 SLC25A46Q96AG3 418 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 EGLN1Q9GZT9 426 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 TIMM10BQ9Y5J6 103 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 TARM1B6A8C7 271 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 AIPO00170 330 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 SSSCA1O60232 199 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 SBK2P0C263 348 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 SELEP16581 610 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 GLRA1P23415 457 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 UBE2G2P60604 165 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 ROBO4Q8WZ75 1007 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 PINX1Q96BK5 328 aaKnown RBP11.02□□□□□ -0.65
COL8A1-201ENST00000261037 MRGPRX1Q96LB2 322 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 HINT3Q9NQE9 182 aaKnown RBP11.02□□□□□ -0.65
COL8A1-201ENST00000261037 C2CD4DB7Z1M9 353 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 THBS1P07996 1170 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 F2RP25116 425 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 NECAP1Q8NC96 275 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 OR52H1Q8NGJ2 320 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 RIMS4Q9H426 269 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-201ENST00000261037 DUSP22Q9NRW4 184 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 SLC23A1Q9UHI7 598 aa11.02□□□□□ -0.65
COL8A1-201ENST00000261037 MICAL3Q7RTP6 2002 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 PAPPAQ13219 1627 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 ABCD4O14678 606 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 YIF1AO95070 293 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 CD22P20273 847 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 SOX18P35713 384 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 RAC1P63000 192 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 SYT6Q5T7P8 510 aaPredicted RBP11.01□□□□□ -0.65
COL8A1-201ENST00000261037 C16orf52Q8NHV5 167 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 SLC25A43Q8WUT9 341 aaPredicted RBP11.01□□□□□ -0.65
COL8A1-201ENST00000261037 ORAI1Q96D31 301 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 MENTQ9BUN1 341 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 TNFRSF12AQ9NP84 129 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 LOXHD1Q8IVV2 1947 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 PLRG1O43660 514 aaKnown RBP11.01□□□□□ -0.65
COL8A1-201ENST00000261037 CXCL13O43927 109 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 HEXAP06865 529 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 IAPPP10997 89 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 ETV6P41212 452 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 CCR2P41597 374 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 CCR9P51686 369 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 CLDN15P56746 228 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 PLAC9Q5JTB6 97 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 SOHLH1Q5JUK2 328 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 LAIR1Q6GTX8 287 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 GLCCI1Q86VQ1 547 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 THNSL2Q86YJ6 484 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 LINC01465Q8N7H1 131 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 BPIFCQ8NFQ6 507 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 OR6K3Q8NGY3 331 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 TIMD4Q96H15 378 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 LAT2Q9GZY6 243 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 GPR84Q9NQS5 396 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 EXO1Q9UQ84 846 aaKnown RBP11.01□□□□□ -0.65
COL8A1-201ENST00000261037 SEMG1P04279 462 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 FLI1Q01543 452 aaPredicted RBP11.01□□□□□ -0.65
COL8A1-201ENST00000261037 PRSS35Q8N3Z0 413 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 C4orf47A7E2U8 309 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 SH2D1BO14796 132 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 OPALINQ96PE5 141 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 ISYNA1Q9NPH2 558 aa11.01□□□□□ -0.65
COL8A1-201ENST00000261037 N4BP2Q86UW6 1770 aaPredicted RBP11.01□□□□□ -0.65
COL8A1-201ENST00000261037 DDX60LQ5H9U9 1706 aaKnown RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 PRRG2O14669 202 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ETHE1O95571 254 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ITGBL1O95965 494 aaPredicted RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 TFAP2EQ6VUC0 442 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms