RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ACVR1Q04771 509 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 OR1M1Q8NGA1 313 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 MED18Q9BUE0 208 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 RTL8AQ9BWD3 113 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 PTPRZ1P23471 2315 aaPredicted RBP17■□□□□ 0.31
SMARCC1-201ENST00000254480 IL2RAP01589 272 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 H2BFWTQ7Z2G1 175 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 OR1S2Q8NGQ3 325 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 MAFAQ8NHW3 353 aaPredicted RBP17■□□□□ 0.31
SMARCC1-201ENST00000254480 ZNF2Q9BSG1 426 aaPredicted RBP17■□□□□ 0.31
SMARCC1-201ENST00000254480 MTCH1Q9NZJ7 389 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 KCNE3Q9Y6H6 103 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 AGAP14A8MT82 685 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 M0R135 149 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 GLCCI1Q86VQ1 547 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 ZNF799Q96GE5 643 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 PLPPR2Q96GM1 343 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 PLA2G12AQ9BZM1 189 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 SERGEFQ9UGK8 458 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 GPX5O75715 221 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 ADIRFQ15847 76 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 CD300LGQ6UXG3 332 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 Q6ZNB5 142 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 PLA2G2FQ9BZM2 168 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 ASIC5Q9NY37 505 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 TLE4Q04727 773 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 DUSP8Q13202 625 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 LPCAT3Q6P1A2 487 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 OR2A1Q8NGT9 310 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 SLC25A43Q8WUT9 341 aaPredicted RBP16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 H7C1Q1 480 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 HLA-DOBP13765 273 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 GP2P55259 537 aaKnown RBP16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 MLF1P58340 268 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 PINX1Q96BK5 328 aaKnown RBP16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 SMOC1Q9H4F8 434 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 EPHA2P29317 976 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 ARRB2P32121 409 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 INSM1Q01101 510 aaPredicted RBP16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 NUDCD2Q8WVJ2 157 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 SARGQ9BW04 601 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 GHRLQ9UBU3 117 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 TTC3P53804 2025 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 DSCR3O14972 297 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 GLB1P16278 677 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 B4GALNT1Q00973 533 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 ANKRD53Q8N9V6 530 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 FSCN3Q9NQT6 498 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 MEIKINA0A087WXM9 373 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 E9PI62 339 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 GLRA1P23415 457 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 PPICP45877 212 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 TAF9Q16594 264 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 SVBPQ8N300 66 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 SFT2D1Q8WV19 159 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 CNRIP1Q96F85 164 aaPredicted RBP16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 REEP6Q96HR9 211 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 LYSMD1Q96S90 227 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 LRRC61Q9BV99 259 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 BCO1Q9HAY6 547 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 FLVCR2Q9UPI3 526 aa16.99■□□□□ 0.31
SMARCC1-201ENST00000254480 PRAMEF5Q5TYX0 476 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 PRAMEF6Q5VXH4 476 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 GINS3Q9BRX5 216 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 A3GALT2U3KPV4 340 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 SHROOM3Q8TF72 1996 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 A0A1W2PR80 420 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 ZNF133P52736 654 aaPredicted RBP16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 MYBPHQ13203 477 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 DHRS4L2Q6PKH6 230 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 TMEM182Q6ZP80 229 aaPredicted RBP16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 TIMM10BQ9Y5J6 103 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CROCCQ5TZA2 2017 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 HLA-BQ31612 363 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 ARIH2OSQ8N7S6 290 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 OPALINQ96PE5 141 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CMC2Q9NRP2 79 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 RNF150Q9ULK6 438 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 OR2I1PQ8NGU4 316 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 SLC25A46Q96AG3 418 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 PROCRQ9UNN8 238 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 TXNDC12O95881 172 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 THBS1P07996 1170 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CT45A6P0DMU7 189 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CT45A5P0DMU8 189 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CT45A7P0DMV0 189 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CT45A8P0DMV1 189 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CT45A9P0DMV2 189 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 GABRG2P18507 467 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 TGM1P22735 817 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 PCBP3P57721 371 aaKnown RBP16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 FOXF1Q12946 379 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CT45A2Q5DJT8 189 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CT45A1Q5HYN5 189 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 AKR7LQ8NHP1 331 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 CT45A3Q8NHU0 189 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 ALKBH3Q96Q83 286 aaPredicted RBP16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 DDOQ99489 341 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
SMARCC1-201ENST00000254480 PIAS2O75928 621 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms