RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CST1P01037 141 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 TFP02787 698 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 BNIP1Q12981 228 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 ZNF362Q5T0B9 420 aaPredicted RBP19.6■□□□□ 0.73
LSM4-201ENST00000252816 MBNL2Q5VZF2 373 aaKnown RBP19.6■□□□□ 0.73
LSM4-201ENST00000252816 CORO6Q6QEF8 472 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 UNQ6126/PRO20091Q6UXV3 157 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 CYB561A3Q8NBI2 242 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 OR10G2Q8NGC3 310 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 OR1F12Q8NHA8 337 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 POFUT1Q9H488 388 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 ELOVL3Q9HB03 270 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 POLR1DQ9Y2S0 133 aa19.6■□□□□ 0.73
LSM4-201ENST00000252816 SOX14O95416 240 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 GCH1P30793 250 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 HIST1H3AP68431 136 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 FLOT2Q14254 428 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 C6orf52Q5T4I8 152 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 HIST2H3PS2Q5TEC6 136 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 TMEM154Q6P9G4 183 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 HIST2H3AQ71DI3 136 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 TMEM179BQ7Z7N9 219 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 C1orf174Q8IYL3 243 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 OR4Q3Q8NH05 313 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 SNX33Q8WV41 574 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 YIPF5Q969M3 257 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 NIPSNAP1Q9BPW8 284 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 TSSK6Q9BXA6 273 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 CADM1Q9BY67 442 aaKnown RBP19.59■□□□□ 0.73
LSM4-201ENST00000252816 TBC1D23Q9NUY8 699 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 TBCCD1Q9NVR7 557 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 POMPQ9Y244 141 aa19.59■□□□□ 0.73
LSM4-201ENST00000252816 LRP5LA4QPB2 252 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 GSC2O15499 205 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 LILRA1O75019 489 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 DBHP09172 617 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 ZNF23P17027 643 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 GSTM3P21266 225 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 ARHGDIAP52565 204 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 CCL8P80075 99 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 TEKQ02763 1124 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 MOGQ16653 247 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 CYB5R2Q6BCY4 276 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 ARL9Q6T311 187 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 SPATA24Q86W54 205 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 LNX2Q8N448 690 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 RDH5Q92781 318 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 ARMC1Q9NVT9 282 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 MRPL22Q9NWU5 206 aaKnown RBP19.58■□□□□ 0.72
LSM4-201ENST00000252816 GRIP1Q9Y3R0 1128 aa19.58■□□□□ 0.72
LSM4-201ENST00000252816 TCRBV3S1A0A5B6 114 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 A8MV72 311 aaPredicted RBP19.57■□□□□ 0.72
LSM4-201ENST00000252816 H3BSA7 217 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 CRLF1O75462 422 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 TACSTD2P09758 323 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 PYCR1P32322 319 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 ERFP50548 548 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 MMP15P51511 669 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 COX10Q12887 443 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 GK3PQ14409 553 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 TRIP10Q15642 601 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 SLC37A3Q8NCC5 494 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 GJC3Q8NFK1 279 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 GIPC3Q8TF64 312 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 ZNRF4Q8WWF5 429 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 FEVQ99581 238 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 CHODLQ9H9P2 273 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 NKIRAS2Q9NYR9 191 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 STARD10Q9Y365 291 aa19.57■□□□□ 0.72
LSM4-201ENST00000252816 ZSCAN5BA6NJL1 495 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 RP2O75695 350 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 ZNF16P17020 682 aaPredicted RBP19.56■□□□□ 0.72
LSM4-201ENST00000252816 ACHEP22303 614 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 GGT2P36268 569 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 ZNF81P51508 661 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 MRPS11P82912 194 aaKnown RBP19.56■□□□□ 0.72
LSM4-201ENST00000252816 PSG7Q13046 419 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 PCGF3Q3KNV8 242 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 SLC18B1Q6NT16 456 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 CD300LDQ6UXZ3 194 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 CFAP77Q6ZQR2 320 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 LINC00346Q8IVM7 164 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 SOX7Q9BT81 388 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 ATPIF1Q9UII2 106 aa19.56■□□□□ 0.72
LSM4-201ENST00000252816 ARRDC5A6NEK1 342 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 FKBP6O75344 327 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 HLA-DQA2P01906 255 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 IL2RGP31785 369 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 GZMKP49863 264 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 TSTQ16762 297 aaKnown RBP19.55■□□□□ 0.72
LSM4-201ENST00000252816 RSPO1Q2MKA7 263 aaPredicted RBP19.55■□□□□ 0.72
LSM4-201ENST00000252816 PRIMA1Q86XR5 153 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 HS3ST5Q8IZT8 346 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 OR2T33Q8NG76 320 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 OR51L1Q8NGJ5 315 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 SLCO4A1Q96BD0 722 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 MSI2Q96DH6 328 aaKnown RBP19.55■□□□□ 0.72
LSM4-201ENST00000252816 COQ7Q99807 217 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 RBM4Q9BWF3 364 aaKnown RBP19.55■□□□□ 0.72
LSM4-201ENST00000252816 HDHD2Q9H0R4 259 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms