RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 H7C1Q1 480 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 GYPBP06028 91 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 NR2C1P13056 603 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 ANPEPP15144 967 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 GSTM3P21266 225 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 MPV17P39210 176 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 ACTR3P61158 418 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 GINS1Q14691 196 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 MAD2L1BPQ15013 274 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-201ENST00000230480 PCK2Q16822 640 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 TMEM236Q5W0B7 351 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 ZNF511Q8NB15 262 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 OR9Q1Q8NGQ5 310 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 NRBF2Q96F24 287 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 SYT3Q9BQG1 590 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 MED20Q9H944 212 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 WDR76Q9H967 626 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 FAIMQ9NVQ4 179 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 PTTG2Q9NZH5 202 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 CYB5R1Q9UHQ9 305 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 FBXL3Q9UKT7 428 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 AP4S1Q9Y587 144 aa11.76□□□□□ -0.53
VEGFA-201ENST00000230480 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.75□□□□□ -0.532e-8■■■□□ 14.7
VEGFA-201ENST00000230480 TVP23AA6NH52 213 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 FAM183AA6NL82 134 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 C12orf71A8MTZ7 269 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 VWC2LB2RUY7 222 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 SSX4O60224 188 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 F12P00748 615 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-201ENST00000230480 COX5BP10606 129 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 OSMP13725 252 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 HOXB6P17509 224 aaKnown RBP11.75□□□□□ -0.53
VEGFA-201ENST00000230480 CRABP1P29762 137 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 POLR2IP36954 125 aaKnown RBP11.75□□□□□ -0.53
VEGFA-201ENST00000230480 RBMXP38159 391 aaKnown RBP11.75□□□□□ -0.53
VEGFA-201ENST00000230480 RANBP1P43487 201 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 EVX1P49640 407 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 PPOXP50336 477 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 SLC25A1P53007 311 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 TEKQ02763 1124 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 HNRNPA0Q13151 305 aaKnown RBP11.75□□□□□ -0.53
VEGFA-201ENST00000230480 CLEC12BQ2HXU8 276 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 SPRNQ5BIV9 151 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 RPL13AP3Q6NVV1 102 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 NAA40Q86UY6 237 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 LINC00346Q8IVM7 164 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 ZNF525Q8N782 197 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 MAPK1IP1LQ8NDC0 245 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 OR5K1Q8NHB7 308 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 KCNS3Q9BQ31 491 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 WACQ9BTA9 647 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 CCNB1IP1Q9NPC3 277 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 CMC2Q9NRP2 79 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 TBC1D23Q9NUY8 699 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 KLHL21Q9UJP4 597 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 STARD10Q9Y365 291 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 CMAHPQ9Y471 501 aa11.75□□□□□ -0.53
VEGFA-201ENST00000230480 IQCMA0A1B0GVH7 501 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 C5orf49A4QMS7 147 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 SGCEO43556 437 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 DEAF1O75398 565 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-201ENST00000230480 RENP00797 406 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 FOSL1P15407 271 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 SPI1P17947 270 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 GRK5P34947 590 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 ALDH3B1P43353 468 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 EFNA4P52798 201 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 AQP6Q13520 282 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 KDM4DQ6B0I6 523 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 IZUMO2Q6UXV1 221 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 COLCA1Q6ZS62 124 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 JAZF1Q86VZ6 243 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 OR2T33Q8NG76 320 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 OR1F12Q8NHA8 337 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 SLC25A40Q8TBP6 338 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 PYDC1Q8WXC3 89 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 TRMT61AQ96FX7 289 aaKnown RBP11.74□□□□□ -0.53
VEGFA-201ENST00000230480 C18orf12Q96KH6 178 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 PKP2Q99959 881 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 GABARAPL1Q9H0R8 117 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 C1orf198Q9H425 327 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 MARCH7Q9H992 704 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 CDH20Q9HBT6 801 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 SLC25A19Q9HC21 320 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 HINT3Q9NQE9 182 aaKnown RBP11.74□□□□□ -0.53
VEGFA-201ENST00000230480 BAIAP2Q9UQB8 552 aa11.74□□□□□ -0.53
VEGFA-201ENST00000230480 LYNX1G3V0Z9 82 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 GNGT2O14610 69 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 SURF4O15260 269 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 NCR1O76036 304 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 STAMBPO95630 424 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 HPXP02790 462 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 ADRA2AP08913 450 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 LYNX1P0DP58 116 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 ANXA8P13928 327 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 SLC2A5P22732 501 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 APLNRP35414 380 aa11.73□□□□□ -0.53
VEGFA-201ENST00000230480 MMP15P51511 669 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms