RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 KCNAB1Q14722 419 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 PCK2Q16822 640 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 Q6ZRG5 221 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 RIMS4Q9H426 269 aaPredicted RBP12.36□□□□□ -0.43
SF3A1-201ENST00000215793 CXorf51AA0A1B0GTR3 108 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 UPK1AO00322 258 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 HSD17B6O14756 317 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 FZD6O60353 706 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 IGHV3-9P01782 118 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 TBPP20226 339 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 ARR3P36575 388 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 OR8G1Q15617 311 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF628Q5EBL2 1059 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 OR10K2Q6IF99 312 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 SIRT6Q8N6T7 355 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 SFT2D1Q8WV19 159 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF416Q9BWM5 594 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 PCYT1BQ9Y5K3 369 aaPredicted RBP12.36□□□□□ -0.43
SF3A1-201ENST00000215793 GLULP15104 373 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 ARL16Q0P5N6 197 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 SOWAHCQ53LP3 525 aaPredicted RBP12.35□□□□□ -0.43
SF3A1-201ENST00000215793 FAM74A1Q5RGS3 127 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 CPEB2Q7Z5Q1 589 aaKnown RBP12.35□□□□□ -0.43
SF3A1-201ENST00000215793 GABRG1Q8N1C3 465 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 KCNRGQ8N5I3 272 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 WBP2Q969T9 261 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 TXNIPQ9H3M7 391 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 TCRBV5S2A0A599 114 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 DEFA4P12838 97 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 RPA2P15927 270 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 TAGLN2P37802 199 aaKnown RBP12.35□□□□□ -0.43
SF3A1-201ENST00000215793 GABRA4P48169 554 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 RNF4P78317 190 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 CDK5R1Q15078 307 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 ADIRFQ15847 76 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 OR8G2PQ6IF36 304 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 FAM122CQ6P4D5 195 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 RHOUQ7L0Q8 258 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 CADM3Q8N126 398 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 SLCO4A1Q96BD0 722 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 MRGPRX4Q96LA9 322 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 S1PR5Q9H228 398 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 CTSFQ9UBX1 484 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 PRSS37A4D1T9 235 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 FXYD1O00168 92 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 IGFBP1P08833 259 aaPredicted RBP12.35□□□□□ -0.43
SF3A1-201ENST00000215793 HCCSP53701 268 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 RAC1P63000 192 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 DEFA6Q01524 100 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 PRAMEF5Q5TYX0 476 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 PRAMEF6Q5VXH4 476 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF626Q68DY1 528 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 FAHD1Q6P587 224 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 BAGE2Q86Y30 109 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 SCCPDHQ8NBX0 429 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 MRGPRX1Q96LB2 322 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 OXGR1Q96P68 337 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 A0A1W2PPC4 97 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 IFITM5A6NNB3 132 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 SLC2A10O95528 541 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 ADH4P08319 380 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 H2AFB1P0C5Y9 115 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 MAGEB1P43366 347 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF85Q03923 595 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 TPBGQ13641 420 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 OR5M1Q8NGP8 315 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 OR2A1Q8NGT9 310 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 GNPNAT1Q96EK6 184 aaPredicted RBP12.35□□□□□ -0.43
SF3A1-201ENST00000215793 FLVCR1Q9Y5Y0 555 aa12.35□□□□□ -0.43
SF3A1-201ENST00000215793 ZC3H12DA2A288 527 aaKnown RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ANKRD61A6NGH8 418 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 SMLR1H3BR10 107 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 IMPA2O14732 288 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 XRCC2O43543 280 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 PLRG1O43660 514 aaKnown RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 DGCR2P98153 550 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 SHHQ15465 462 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 IL34Q6ZMJ4 242 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 Q6ZNB5 142 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 LHFPL2Q6ZUX7 228 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 RIMKLAQ8IXN7 391 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 SARAFQ96BY9 339 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 TIMD4Q96H15 378 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 IKZF5Q9H5V7 419 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 SLC5A6Q9Y289 635 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 MN1Q10571 1320 aaPredicted RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 PPP1R2P9O14990 202 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 DBPQ10586 325 aaPredicted RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 SNTB1Q13884 538 aaKnown RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 HES1Q14469 280 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 PAQR6Q6TCH4 344 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 PTOV1Q86YD1 416 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 DYNC2LI1Q8TCX1 351 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 KCNE4Q8WWG9 221 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 TMEM235A6NFC5 223 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms