RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Apoc2Q05020 97 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Acsf3Q3URE1 583 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Klhdc2Q4G5Y1 406 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc26a10Q5EBI0 492 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 CstbQ62426 98 aaKnown RBP7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Sidt1Q6AXF6 827 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 IppkQ6P1C1 489 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1463Q7TQR3 310 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr851Q7TRG0 312 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zdhhc25Q810M4 279 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rgp1Q8BHT7 391 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 MaelQ8BVN9 434 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lrrn3Q8CBC6 707 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 BivmQ8CBX9 502 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Srsf4Q8VE97 489 aaKnown RBP7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr642Q924X8 314 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Dusp22Q99N11 184 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmem9Q9CR23 183 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 1700020A23RikQ9DA59 131 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr887Q9EQA6 309 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Muc5acE9QAQ8 3455 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tnrc6aQ3UHK8 1896 aaKnown RBP7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Sac3d1A6H687 427 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm8973D3YX71 104 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Chst3O88199 472 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gpr50O88495 591 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 RradO88667 308 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gpd1P13707 349 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Sox6P40645 827 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tnfrsf26P83626 204 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 GnrhrQ01776 327 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Atf4Q06507 349 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr733Q14AK5 308 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmem253Q3UNB8 204 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mtcp1Q60945 107 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Nptx1Q62443 432 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 F12Q80YC5 597 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 ScaiQ8C8N2 606 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 ShfQ8CG80 238 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Efcab7Q8VDY4 628 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr803Q8VFI3 308 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Plpp7Q91WB2 271 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 MrgprgQ91ZB5 289 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rad51cQ924H5 366 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc6a19Q9D687 634 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 LhppQ9D7I5 270 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmem41aQ9D8U2 264 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Osbpl3Q9DBS9 855 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r172Q9EPS4 313 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr948Q9EQ95 321 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ilf3Q9Z1X4 898 aaKnown RBP7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Dgat1Q9Z2A7 498 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 H2afb1S4R1E0 115 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 H2afb3S4R1G7 115 aa7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 SpenQ62504 3644 aaKnown RBP7.78□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1315-ps1A0A140LI66 314 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm17949A0A1B0GRV7 212 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mllt6B1AR10 1109 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fbxw28E9Q8A4 466 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 MfngO09008 321 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Kcns1O35173 497 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rnase2bO35292 155 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Bet1O35623 118 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Igh-1aP01865 398 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Guca2aP33680 116 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Itgb8Q0VBD0 767 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Orm1Q60590 207 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 ArhgdigQ62160 225 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cfap161Q6P8Y0 303 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr506Q7TRU6 314 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 BspryQ80YW5 473 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 TifabQ8JZM6 147 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Swi5Q8K3D3 89 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vmn1r220Q8R272 298 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1316Q8VG12 314 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Oasl1Q8VI94 511 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Q99LU8 229 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Chmp1b2Q9CQD4 199 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Spesp1Q9D5A0 399 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Wdr12Q9JJA4 423 aa7.77□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1223A0A1L1SU13 311 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Dgat2l6A2ADU8 337 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Muc3E9PWP7 378 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr610E9Q598 315 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Vmn2r48E9Q5D8 855 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm2035J3QP87 144 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Lmx1bO88609 395 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Wfdc18P62810 74 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rac1P63001 192 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 MpgQ04841 333 aaKnown RBP7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1115Q7TR53 326 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr524Q7TRU0 318 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Mogat2Q80W94 334 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm10283Q8C3L5 117 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cnppd1Q8K158 407 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cacnb4Q8R0S4 519 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Znf385aQ8VD12 386 aaKnown RBP7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1100Q8VFM1 321 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr807Q8VGI9 311 aa7.77□□□□□ -1.17
Trim39-201ENSMUST00000042717 As3mtQ91WU5 376 aa7.77□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms