RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Clec4dQ9Z2H6 219 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1084A0A1L1STZ9 313 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ajm1A2AJA9 974 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 DytnA2CI98 653 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Oosp3G5E8D7 195 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Adrb1P34971 466 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cdk5P49615 292 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rab5bP61021 215 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Clec7aQ6QLQ4 244 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Exosc3Q7TQK4 274 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fam98bQ80VD1 429 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 A730049H05RikQ8C940 139 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nudt21Q9CQF3 227 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmem30cQ9D4D7 342 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zc3h8Q9JJ48 305 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmem37Q9JJV3 211 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Lgals8Q9JL15 316 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Socs6Q9JLY0 533 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gpr37Q9QY42 600 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm28557A0A087WQQ0 336 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Btbd35f28A2CFD5 498 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Mfsd4b5E9PYY6 479 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Btbd35f30J3QML3 498 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ptpn22P29352 802 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cd55Q61475 390 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cd47Q61735 303 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Abhd16bQ80YU0 474 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Elfn1Q8C8T7 828 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr73Q920P2 313 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Sectm1aQ921W8 192 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Spred1Q924S8 444 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Wdr89Q9D0R9 386 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rtp4Q9ER80 249 aaKnown RBP9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Chrm2Q9ERZ4 466 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Exo1Q9QZ11 837 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 MiipA2A7Y5 387 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm11127A7VMS2 374 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr417F8VQB1 309 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Lef1P27782 397 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ceacam19Q3TQ88 271 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 AhrrQ3U1U7 701 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Eml4Q3UMY5 988 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dvl2Q60838 736 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Art1Q60935 325 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr32Q7TQZ0 308 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr517Q7TRU4 314 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Kansl1Q80TG1 1036 aaKnown RBP9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fmr1nbQ80ZA7 238 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 CcsapQ8QZT2 252 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Wfikkn1Q8R0S6 552 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ccdc58Q8R3Q6 144 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr308Q8VFP2 308 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tspan31Q9CQ88 210 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dusp3Q9D7X3 185 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vstm5Q9D806 199 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm11214V9GX06 183 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 SisF8VQM5 1818 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 EdaO54693 391 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Hmgn2P09602 90 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zfp26P10076 861 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 GdnfP48540 211 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fgf9P54130 208 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Galr1P56479 348 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pcbp3P57722 371 aaKnown RBP9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 NptnP97300 397 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tie1Q06806 1134 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 KcnrgQ2TUM3 264 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dyrk1aQ61214 763 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cramp1Q6PG95 1285 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rcc2Q8BK67 520 aaKnown RBP9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fbxw14Q8C2Y5 466 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 RydenQ8CAK3 290 aaKnown RBP9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr361Q8VF16 322 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr341Q8VGK9 313 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Mob1aQ921Y0 216 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nqo2Q9JI75 231 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tbl1xQ9QXE7 527 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Lrit3W8DXL4 681 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Igkv17-127A0A0G2JDN5 117 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1130A0A1L1SQT2 314 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1129A2AV41 314 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm12789B1AUV7 164 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn2r113E9PZA6 856 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Adamts3E9Q287 1204 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 H2-T10F6T1I5 379 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 LepP41160 167 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Map2k4P47809 397 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cdk5r1P61809 307 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ces2fQ08ED5 561 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nxph2Q61199 261 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pou4f3Q63955 338 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Kcmf1Q80UY2 381 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 PigzQ8BTP0 560 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Sec14l4Q8R0F9 403 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ropn1lQ9EQ00 218 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vstm2bQ9JME9 285 aa9.44□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tsc2Q61037 1814 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Spata31d1cE9QAF1 853 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 RbpjlO08674 515 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tgfb1P04202 390 aa9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms