RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 IGHV3-9P01782 118 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 MSR1P21757 451 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 CALRP27797 417 aaKnown RBP15.5■□□□□ 0.07
PHGDH-232ENST00000641947 HSPB2Q16082 182 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 MS4A15Q8N5U1 240 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 OR10AC1Q8NH08 325 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 EXTL1Q92935 676 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 SLC25A46Q96AG3 418 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 ABHD17AQ96GS6 310 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 MED18Q9BUE0 208 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 NELFAQ9H3P2 528 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 CALHM2Q9HA72 323 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 SLC22A13Q9Y226 551 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 NOSIPQ9Y314 301 aaKnown RBP15.5■□□□□ 0.07
PHGDH-232ENST00000641947 CHD8Q9HCK8 2581 aa15.5■□□□□ 0.07
PHGDH-232ENST00000641947 A0A1W2PPK0 400 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 AQP7O14520 342 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 RER1O15258 196 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 GPRIN2O60269 458 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 RIDAP52758 137 aaKnown RBP15.49■□□□□ 0.07
PHGDH-232ENST00000641947 MRPL28Q13084 256 aaKnown RBP15.49■□□□□ 0.07
PHGDH-232ENST00000641947 HNRNPA0Q13151 305 aaKnown RBP15.49■□□□□ 0.07
PHGDH-232ENST00000641947 ODF4Q2M2E3 257 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 PLEKHN1Q494U1 663 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-232ENST00000641947 ZMAT1Q5H9K5 638 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 TSPO2Q5TGU0 170 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 RDH10Q8IZV5 341 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 IL17RDQ8NFM7 739 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 ORAI1Q96D31 301 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 PRRG4Q9BZD6 226 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 C1orf198Q9H425 327 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 CENPMQ9NSP4 180 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 PLEKHB1Q9UF11 243 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-232ENST00000641947 TP53TG5Q9Y2B4 290 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 POLR1DQ9Y2S0 133 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 ZNF281Q9Y2X9 895 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 H3BSH0 61 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 PIN1P1O15428 100 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 TMCC2O75069 709 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 ANOS1P23352 680 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 UNQ9370/PRO34162Q6UXP9 181 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 ADGRE4PQ86SQ3 457 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 CATSPERDQ86XM0 798 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 OR51A4Q8NGJ6 313 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 OR5AK2Q8NH90 309 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 ZFAND2BQ8WV99 257 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 KCNS3Q9BQ31 491 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 KCNN2Q9H2S1 579 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 SIAEQ9HAT2 523 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 GPR35Q9HC97 309 aa15.49■□□□□ 0.07
PHGDH-232ENST00000641947 CACNA1AO00555 2505 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 ZNF724A8MTY0 619 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 MKRN2OSH3BPM6 223 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 GPR171O14626 319 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 RRP8O43159 456 aaKnown RBP15.48■□□□□ 0.07
PHGDH-232ENST00000641947 ADRB1P08588 477 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 BMXP51813 675 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 LSM6P62312 80 aaKnown RBP15.48■□□□□ 0.07
PHGDH-232ENST00000641947 MRPS34P82930 218 aaKnown RBP15.48■□□□□ 0.07
PHGDH-232ENST00000641947 ROR2Q01974 943 aaKnown RBP15.48■□□□□ 0.07
PHGDH-232ENST00000641947 YIF1BQ5BJH7 314 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 NUFIP2Q7Z417 695 aaKnown RBP15.48■□□□□ 0.07
PHGDH-232ENST00000641947 FGD2Q7Z6J4 655 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 GPR137CQ8N3F9 429 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 LRRC18Q8N456 261 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 HAVCR2Q8TDQ0 301 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 C6orf62Q9GZU0 229 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-232ENST00000641947 SLCO5A1Q9H2Y9 848 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 MMP27Q9H306 513 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 RNF122Q9H9V4 155 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 AKIP1Q9NQ31 210 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 G6PC2Q9NQR9 355 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 SLC7A10Q9NS82 523 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 TMEM38BQ9NVV0 291 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 EMC3Q9P0I2 261 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 B3GNT3Q9Y2A9 372 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 EMC9Q9Y3B6 208 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 R4GMQ9 66 aa15.48■□□□□ 0.07
PHGDH-232ENST00000641947 ACOD1A6NK06 481 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 SLC22A20A6NK97 555 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 CASKO14936 926 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 DOK2O60496 412 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 MRPL33O75394 65 aaKnown RBP15.47■□□□□ 0.07
PHGDH-232ENST00000641947 UCHL1P09936 223 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 H2BFMP0C1H6 154 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 BMP4P12644 408 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 SOX6P35712 828 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 ZNF84P51523 738 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 FOXG1P55316 489 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-232ENST00000641947 RNPS1Q15287 305 aaKnown RBP15.47■□□□□ 0.07
PHGDH-232ENST00000641947 MOGQ16653 247 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 CEACAM16Q2WEN9 425 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 RIPPLY2Q5TAB7 128 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 DEGS2Q6QHC5 323 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 CHMP1BQ7LBR1 199 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 CPT1CQ8TCG5 803 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 FBXO17Q96EF6 278 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 CLCF1Q9UBD9 225 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 A3GALT2U3KPV4 340 aa15.47■□□□□ 0.07
PHGDH-232ENST00000641947 TRBV5-5A0A0J9YX44 114 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms