RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 RFLNBQ8N5W9 214 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 SLC37A3Q8NCC5 494 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 BBS1Q8NFJ9 593 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 STEAP2Q8NFT2 490 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 OR52E2Q8NGJ4 325 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 OR9Q1Q8NGQ5 310 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 OR52N5Q8NH56 324 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 FGFBP3Q8TAT2 258 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ZNRF4Q8WWF5 429 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 NRG4Q8WWG1 115 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 EME1Q96AY2 570 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 DDOQ99489 341 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 FOXB1Q99853 325 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 C9orf16Q9BUW7 83 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 HCAR1Q9BXC0 346 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 NUAK2Q9H093 628 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 TOR3AQ9H497 397 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 MED20Q9H944 212 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 SEC61A2Q9H9S3 476 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 RNPEPL1Q9HAU8 725 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 RPRD1BQ9NQG5 326 aaKnown RBP6.4□□□□□ -1.38
PHGDH-225ENST00000641720 SLC17A5Q9NRA2 495 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 CMC2Q9NRP2 79 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 BAIAP2Q9UQB8 552 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 RRP15Q9Y3B9 282 aaKnown RBP6.4□□□□□ -1.38
PHGDH-225ENST00000641720 SLC25A15Q9Y619 301 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 DNAH9Q9NYC9 4486 aa6.4□□□□□ -1.39
PHGDH-225ENST00000641720 TANC2Q9HCD6 1990 aa6.4□□□□□ -1.39
PHGDH-225ENST00000641720 COL7A1Q02388 2944 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 FAM183AA6NL82 134 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 RIIAD1A6NNX1 92 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 E9PQ18 207 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 H0YHG0 523 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 DLGAP1O14490 977 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 CASQ2O14958 399 aaPredicted RBP6.39□□□□□ -1.39
PHGDH-225ENST00000641720 SURF4O15260 269 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 AHCYL1O43865 530 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 PRKYO43930 277 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 MGRN1O60291 552 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 SLC16A7O60669 478 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 MPZL1O95297 269 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 SNAP29O95721 258 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 RENP00797 406 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 HLA-HP01893 362 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 GYPBP06028 91 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 CELA3BP08861 270 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 PATE4P0C8F1 98 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 GAAP10253 952 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 CLUP10909 449 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 PSKH1P11801 424 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 ZNF3P17036 446 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 USF1P22415 310 aaPredicted RBP6.39□□□□□ -1.39
PHGDH-225ENST00000641720 PYCR1P32322 319 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 GIPRP48546 466 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 ZNF83P51522 516 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 NUDT6P53370 316 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 CDH11P55287 796 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 DSCR9P59020 149 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 MRPS34P82930 218 aaKnown RBP6.39□□□□□ -1.39
PHGDH-225ENST00000641720 TGFBR3Q03167 851 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 NPRL3Q12980 569 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 PPA1Q15181 289 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 PTGES3Q15185 160 aaKnown RBP6.39□□□□□ -1.39
PHGDH-225ENST00000641720 MST1LQ2TV78 715 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 CR1LQ2VPA4 569 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 TIMM23BQ5SRD1 257 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 THEM4Q5T1C6 240 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 OGFRL1Q5TC84 451 aaPredicted RBP6.39□□□□□ -1.39
PHGDH-225ENST00000641720 SLX4IPQ5VYV7 408 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 C12orf73Q69YU5 71 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 ALKBH2Q6NS38 261 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 CLEC2AQ6UVW9 174 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 UGT2A3Q6UWM9 527 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 ZBTB49Q6ZSB9 765 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 SKA3Q8IX90 412 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 GALNT4Q8N4A0 578 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 C17orf78Q8N4C9 275 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 SLC22A24Q8N4F4 322 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 OR51L1Q8NGJ5 315 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 FAM168AQ92567 244 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 BOD1Q96IK1 185 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 MUS81Q96NY9 551 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 SNX18Q96RF0 628 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 SH3GL3Q99963 347 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 C1QTNF6Q9BXI9 259 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 HDHD5Q9BXW7 423 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 NMNAT2Q9BZQ4 307 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 RERGLQ9H628 205 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 DCLRE1BQ9H816 532 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 CHODLQ9H9P2 273 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 EMC7Q9NPA0 242 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 HINT3Q9NQE9 182 aaKnown RBP6.39□□□□□ -1.39
PHGDH-225ENST00000641720 CBLN4Q9NTU7 201 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 KLHL21Q9UJP4 597 aa6.39□□□□□ -1.39
PHGDH-225ENST00000641720 ARPC4-TTLL3A0A0A6YYG9 625 aa6.38□□□□□ -1.39
PHGDH-225ENST00000641720 TMEM89A2RUT3 159 aa6.38□□□□□ -1.39
PHGDH-225ENST00000641720 ABCD4O14678 606 aa6.38□□□□□ -1.39
PHGDH-225ENST00000641720 ICMTO60725 284 aa6.38□□□□□ -1.39
PHGDH-225ENST00000641720 KHDRBS3O75525 346 aaKnown RBP6.38□□□□□ -1.39
PHGDH-225ENST00000641720 ATP6V1G2O95670 118 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms