RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ZNF248Q8NDW4 579 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 RPS4Y2Q8TD47 263 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 NUDCD2Q8WVJ2 157 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 SEH1LQ96EE3 360 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 RABL2AQ9UBK7 228 aaPredicted RBP13.12□□□□□ -0.31
SCARB2-221ENST00000640341 COPS7AQ9UBW8 275 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 KIF25Q9UIL4 384 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 MMP17Q9ULZ9 603 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 RABL2BQ9UNT1 228 aa13.12□□□□□ -0.31
SCARB2-221ENST00000640341 C13orf42A0A1B0GVH6 325 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 LOC107986453A0A1B0GWG9 222 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 EEF1E1-BLOC1S5C9J1V9 151 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 TSPAN9O75954 239 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 AHSA1O95433 338 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 SLC2A1P11166 492 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 PGCP20142 388 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 LUMP51884 338 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 IGLV3-21P80748 117 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 TAGLNQ01995 201 aaKnown RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 GLO1Q04760 184 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 NR0B2Q15466 257 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 C1orf140Q5VVS0 124 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 RGS7BPQ6MZT1 257 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 MRPL38Q96DV4 380 aaKnown RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ARL5BQ96KC2 179 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 SLC6A7Q99884 636 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 BGLAPP02818 100 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 DCNP07585 359 aaKnown RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ACTBP60709 375 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ACTG1P63261 375 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 POU3F1Q03052 451 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF584Q8IVC4 421 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF75AQ96N20 296 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 CDCA3Q99618 268 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 COMMD9Q9P000 198 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 HOXD4P09016 255 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ABCD3P28288 659 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 EFNA3P52797 238 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 OR1D5P58170 312 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 TAS2R19P59542 299 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF660Q6AZW8 331 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-221ENST00000640341 FGGYQ96C11 551 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 SLC41A2Q96JW4 573 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 ARPC5LQ9BPX5 153 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 REG4Q9BYZ8 158 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 LANCL2Q9NS86 450 aa13.11□□□□□ -0.31
SCARB2-221ENST00000640341 CD34P28906 385 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 AVPR2P30518 371 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 FBXW4P57775 412 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 PMPCAQ10713 525 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 EMC4Q5J8M3 183 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 OR4D6Q8NGJ1 314 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 OR10K1Q8NGX5 313 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 RNF128Q8TEB7 428 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 SEC61A2Q9H9S3 476 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF275Q9NSD4 429 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-221ENST00000640341 TAS2R3Q9NYW6 316 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 POLR1DQ9Y2S0 133 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 ATP6V1G2-DDX39BF2Z307 99 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 EBPQ15125 230 aaKnown RBP13.1□□□□□ -0.31
SCARB2-221ENST00000640341 ELOCQ15369 112 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 UNQ6126/PRO20091Q6UXV3 157 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 SLC29A4Q7RTT9 530 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 LAT2Q9GZY6 243 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 HHLA2Q9UM44 414 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 A0A1W2PPC4 97 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 CSF2RBP32927 897 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 PRKXP51817 358 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 CAPZA1P52907 286 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 DHRS2Q13268 280 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF721Q8TF20 911 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 CCDC107Q8WV48 283 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 CYYR1Q96J86 154 aa13.1□□□□□ -0.31
SCARB2-221ENST00000640341 DUSP15Q9H1R2 295 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-221ENST00000640341 IGKV1D-43A0A0B4J1Z2 117 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 OR5H14A6NHG9 310 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 NPIPA5E9PKD4 350 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 DDAH2O95865 285 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 TXNDC12O95881 172 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 ZP3P21754 424 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 ATRAIDQ6UW56 229 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 TMPRSS9Q7Z410 1059 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 ZNF578Q96N58 590 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-221ENST00000640341 ADAM19Q9H013 955 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 UPB1Q9UBR1 384 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 NPIPA1Q9UND3 350 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
SCARB2-221ENST00000640341 FRG2CA6NGY1 282 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 PHYHO14832 338 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 H2BFMP0C1H6 154 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 RNASE10Q5GAN6 216 aaKnown RBP13.09□□□□□ -0.31
SCARB2-221ENST00000640341 ATPAF1Q5TC12 328 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-221ENST00000640341 CARD17Q5XLA6 110 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 OR13C9Q8NGT0 318 aa13.09□□□□□ -0.31
SCARB2-221ENST00000640341 OR1S1Q8NH92 325 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms