RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SMN1Q16637 294 aaKnown RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 HIST3H3Q16695 136 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 SLC25A30Q5SVS4 291 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 SYT6Q5T7P8 510 aaPredicted RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 MEDAGQ5VYS4 303 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 TMEM236Q5W0B7 351 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 ZNF613Q6PF04 617 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 MBOAT2Q6ZWT7 520 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 AHSA2Q719I0 299 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 LRP11Q86VZ4 500 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 SKA3Q8IX90 412 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 CDK20Q8IZL9 346 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 PAQR4Q8N4S7 273 aaPredicted RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 CLDN22Q8N7P3 220 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 SCAIQ8N9R8 606 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 NUP37Q8NFH4 326 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 PFN4Q8NHR9 129 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 TEX47Q8TBZ9 253 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 SGCDQ92629 289 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 C12orf43Q96C57 262 aaKnown RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 MPP4Q96JB8 637 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 LRR1Q96L50 414 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 HS6ST2Q96MM7 605 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 FOXN4Q96NZ1 517 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 TNFRSF13CQ96RJ3 184 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 TMEM27Q9HBJ8 222 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 ACOT13Q9NPJ3 140 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 FAIMQ9NVQ4 179 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 MYEF2Q9P2K5 600 aaKnown RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 WARS2Q9UGM6 360 aaKnown RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 SLC7A7Q9UM01 511 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 TMEM5Q9Y2B1 443 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 IRGMA1A4Y4 181 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 OR6C65A6NJZ3 312 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 SNTNA6NMZ2 147 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 C11orf98E9PRG8 122 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 LYNX1G3V0Z9 82 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 H3BMQ9 156 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 PIP5K1CO60331 668 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 SOX14O95416 240 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 FADS2O95864 444 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 CH25HO95992 272 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 WNT11O96014 354 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 TP53P04637 393 aaPredicted RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 PGA4P0DJD7 388 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 PGA3P0DJD8 388 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 LYNX1P0DP58 116 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 HOXB1P14653 301 aaPredicted RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 B4GALT1P15291 398 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 SERPINF1P36955 418 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 OMPP47874 163 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 BIDP55957 195 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 SRSF2Q01130 221 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 PIGFQ07326 219 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 ZP4Q12836 540 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 HNRNPA0Q13151 305 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 DYNC1I2Q13409 638 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 MELKQ14680 651 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 GINS1Q14691 196 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 RAB35Q15286 201 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 C1QTNF12Q5T7M4 302 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 UBE2UQ5VVX9 321 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 RPL13AP3Q6NVV1 102 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 SLC27A4Q6P1M0 643 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 VHLLQ6RSH7 139 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 C5orf46Q6UWT4 87 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 PXKQ7Z7A4 578 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 MEX3DQ86XN8 651 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 ANKRD13BQ86YJ7 626 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 UEVLDQ8IX04 471 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 STX19Q8N4C7 294 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 LRRC75AQ8NAA5 344 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 OR5J2Q8NH18 312 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 TMEM255BQ8WV15 326 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 GGHQ92820 318 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 ADAD1Q96M93 576 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 COG8Q96MW5 612 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 CDCA4Q9BXL8 241 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 MRPL13Q9BYD1 178 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 MRPL37Q9BZE1 423 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 ZNF442Q9H7R0 627 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 FKRPQ9H9S5 495 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 BARX1Q9HBU1 254 aaPredicted RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 YAE1D1Q9NRH1 226 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 RPS6KB2Q9UBS0 482 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 AASSQ9UDR5 926 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 RPL36Q9Y3U8 105 aaKnown RBP6.75□□□□□ -1.33
PNKP-229ENST00000637897 CORINQ9Y5Q5 1042 aa6.75□□□□□ -1.33
PNKP-229ENST00000637897 LRP5LA4QPB2 252 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 HTR3EA5X5Y0 456 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 B9A039 149 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 KPNA4O00629 521 aaPredicted RBP6.74□□□□□ -1.33
PNKP-229ENST00000637897 WNT9BO14905 357 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 TLX2O43763 284 aaPredicted RBP6.74□□□□□ -1.33
PNKP-229ENST00000637897 LILRA1O75019 489 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 SERPINI2O75830 405 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 KRT33AO76009 404 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 INMTO95050 263 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 HMGN1P05114 100 aa6.74□□□□□ -1.33
PNKP-229ENST00000637897 ZNF16P17020 682 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms