RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 ROBO4Q8WZ75 1007 aa8.65□□□□□ -1.02
CACNA1A-248ENST00000637774 SLAMF6Q96DU3 332 aa8.65□□□□□ -1.02
CACNA1A-248ENST00000637774 JAM3Q9BX67 310 aa8.65□□□□□ -1.02
CACNA1A-248ENST00000637774 OR52A1Q9UKL2 312 aa8.65□□□□□ -1.02
CACNA1A-248ENST00000637774 HHLA2Q9UM44 414 aa8.65□□□□□ -1.02
CACNA1A-248ENST00000637774 SPATA2Q9UM82 520 aa8.65□□□□□ -1.02
CACNA1A-248ENST00000637774 LOC107986453A0A1B0GWG9 222 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 CD53P19397 219 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 RBMS1P29558 406 aaKnown RBP8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 POU3F4P49335 361 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 CYB561P49447 251 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 PXKQ7Z7A4 578 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 OR51A2Q8NGJ7 313 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 OR52I2Q8NH67 350 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 POC1BQ8TC44 478 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 ASB10Q8WXI3 467 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 RNF170Q96K19 258 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 CHIAQ9BZP6 476 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 MED28Q9H204 178 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 OR10A4Q9H209 315 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 DPAGT1Q9H3H5 408 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 C1orf198Q9H425 327 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 LRFN1Q9P244 771 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 SLC5A6Q9Y289 635 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 ALG5Q9Y673 324 aa8.65□□□□□ -1.03
CACNA1A-248ENST00000637774 A0A1B0GVI7 797 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 AIPO00170 330 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 NTN3O00634 580 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 TXNDC12O95881 172 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 PLATP00750 562 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ZNF20P17024 532 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 CDK2P24941 298 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 LAP3P28838 519 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 EGR3Q06889 387 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ZFP36L1Q07352 338 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ACER2Q5QJU3 275 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 TMPPEQ6ZT21 453 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 FAM57BQ71RH2 274 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 BEST3Q8N1M1 668 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 BMPERQ8N8U9 685 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 OR5D18Q8NGL1 313 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ELP5Q8TE02 316 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 LIPHQ8WWY8 451 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ASB17Q8WXJ9 295 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ZC3H10Q96K80 434 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 DIABLOQ9NR28 239 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 CHCHD2Q9Y6H1 151 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 IGLV1-36A0A0B4J1U3 117 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 TRAV1-2A0A0B4J238 106 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 A0A0G2JK05 382 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 CXCL13O43927 109 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 LMX1BO60663 402 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 TOXO94900 526 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 KDM4BO94953 1096 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 UBL3O95164 117 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 EIF1P41567 113 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 KIR3DL2P43630 455 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 TGIF1Q15583 401 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 RAB11BQ15907 218 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 GLT8D1Q68CQ7 371 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 TIGD3Q6B0B8 471 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 WDFY1Q8IWB7 410 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ZNF519Q8TB69 540 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 FCAMRQ8WWV6 532 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ITPKCQ96DU7 683 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 IRF2BPLQ9H1B7 796 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 WDR54Q9H977 334 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 PLEK2Q9NYT0 353 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 FOXJ2Q9P0K8 574 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 OR5V1Q9UGF6 321 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 MED13Q9UHV7 2174 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 A0A0G2JMM0 328 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 LOC101059948A0A1B0GTJ6 334 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 A0A1W2PPB8 328 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 A0A1W2PRS3 328 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 KIR3DP1A8MWS1 328 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 FTCDNL1E5RQL4 147 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ZNHIT1O43257 154 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 MT-CO3P00414 261 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 HCKP08631 526 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 THBS2P35442 1172 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 SUMO3P55854 103 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 CLDN20P56880 219 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 SNRPD2P62316 118 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 SLC35A1P78382 337 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 SF3B4Q15427 424 aaKnown RBP eCLIP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ATAD3CQ5T2N8 411 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 HES3Q5TGS1 186 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 SLC25A25Q6KCM7 469 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 MAMSTRQ6ZN01 415 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 NAXDQ8IW45 347 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 OR51E1Q8TCB6 317 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ADAMTS14Q8WXS8 1223 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ZNF385AQ96PM9 386 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 ULBP2Q9BZM5 246 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 PAQR5Q9NXK6 330 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 FBXO4Q9UKT5 387 aa8.64□□□□□ -1.03
CACNA1A-248ENST00000637774 PATE4P0C8F1 98 aa8.63□□□□□ -1.03
CACNA1A-248ENST00000637774 ADRA2CP18825 462 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms