RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 IGF2P01344 180 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CPEP16870 476 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CD40P25942 277 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 SLC9A3P48764 834 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 ETV1P50549 477 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 SLC16A1P53985 500 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 FXYD6P3P58550 94 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 C1QTNF12Q5T7M4 302 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CLEC2AQ6UVW9 174 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 GRINAQ7Z429 371 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CADM2Q8N3J6 435 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 ZNF563Q8TA94 476 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 ARL5BQ96KC2 179 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 SLC19A3Q9BZV2 496 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 NXF2Q9GZY0 626 aaKnown RBP11.04□□□□□ -0.64
CTSD-208ENST00000636843 OCEL1Q9H607 264 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CMC2Q9NRP2 79 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 MALT1Q9UDY8 824 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 POU2F3Q9UKI9 436 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 STUB1Q9UNE7 303 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 MXRA5Q9NR99 2828 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 A0A087WUJ7 227 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 A0A096LNT2 108 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 ELOA3DA6NLF2 546 aaPredicted RBP11.03□□□□□ -0.64
CTSD-208ENST00000636843 MRPL33O75394 65 aaKnown RBP11.03□□□□□ -0.64
CTSD-208ENST00000636843 IGHV3-9P01782 118 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 IGHA1P01876 353 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 ZNF12P17014 697 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 PTNP21246 168 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 SLC6A6P31641 620 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 SOX6P35712 828 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 TGFBR1P36897 503 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 HTR3AP46098 478 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 ZNF83P51522 516 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 RAB35Q15286 201 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 ELOA3BQ3SY89 546 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 ZNF544Q6NX49 715 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 OAFQ86UD1 273 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 ZBTB46Q86UZ6 589 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 ADGRG3Q86Y34 549 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 CPOQ8IVL8 374 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 MUC15Q8N387 334 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 ELOA3Q8NG57 546 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 OR13C2Q8NGS9 318 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 FNDC8Q8TC99 324 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 TMEM158Q8WZ71 300 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 SGTBQ96EQ0 304 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 TNFRSF13CQ96RJ3 184 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 CENPOQ9BU64 300 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 IFT27Q9BW83 186 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 HINT3Q9NQE9 182 aaKnown RBP11.03□□□□□ -0.64
CTSD-208ENST00000636843 SSR3Q9UNL2 185 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 TRAPPC4Q9Y296 219 aa11.03□□□□□ -0.64
CTSD-208ENST00000636843 H7C417 338 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 M0R1B8 84 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 GPRIN2O60269 458 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 EIF1BO60739 113 aaKnown RBP11.02□□□□□ -0.65
CTSD-208ENST00000636843 PNMTP11086 282 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 SLC25A16P16260 332 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 PAICSP22234 425 aaKnown RBP11.02□□□□□ -0.65
CTSD-208ENST00000636843 NTF4P34130 210 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 SLC1A3P43003 542 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 FABP6P51161 128 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 OR2B6P58173 313 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 LOXL1Q08397 574 aaPredicted RBP11.02□□□□□ -0.65
CTSD-208ENST00000636843 TPBGQ13641 420 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 GABRA6Q16445 453 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 TMEM249Q2WGJ8 235 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 WBP2NLQ6ICG8 309 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 NIPAL3Q6P499 406 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 PAQR6Q6TCH4 344 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 MEPCEQ7L2J0 689 aaKnown RBP11.02□□□□□ -0.65
CTSD-208ENST00000636843 PHC2Q8IXK0 858 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 KLHL36Q8N4N3 616 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 PARPBPQ9NWS1 579 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 TMEM160Q9NX00 188 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 IL20RAQ9UHF4 553 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 CDC42EP3Q9UKI2 254 aa11.02□□□□□ -0.65
CTSD-208ENST00000636843 SLC22A31A6NKX4 558 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 RIIAD1A6NNX1 92 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 PRR23D1E9PI22 279 aaPredicted RBP11.01□□□□□ -0.65
CTSD-208ENST00000636843 GPX5O75715 221 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 SLC2A10O95528 541 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 IFNGP01579 166 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 ITGA5P08648 1049 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 TSPAN19P0C672 248 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 FAM157CP0CG43 387 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 LIMS3P0CW19 117 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 LIMS4P0CW20 117 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 PRR23D2P0DMB1 279 aaPredicted RBP11.01□□□□□ -0.65
CTSD-208ENST00000636843 BMP4P12644 408 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 ZNF3P17036 446 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 FUT1P19526 365 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 ATP6V1E1P36543 226 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 CRYBB2P43320 205 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 MAP2K6P52564 334 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 H3F3AP84243 136 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 SPOCK1Q08629 439 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 ACSM1Q08AH1 577 aa11.01□□□□□ -0.65
CTSD-208ENST00000636843 THSD4Q6ZMP0 1018 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms