RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PTP4A1Q93096 173 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 MUCL1Q96DR8 90 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF582Q96NG8 517 aaPredicted RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 DCLRE1CQ96SD1 692 aaKnown RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 INTS14Q96SY0 518 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 CNN2Q99439 309 aaKnown RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 TEAD3Q99594 435 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 TMPRSS13Q9BYE2 586 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 NIPAL2Q9H841 368 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 WDR76Q9H967 626 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 CCNB1IP1Q9NPC3 277 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF226Q9NYT6 803 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 CRNNQ9UBG3 495 aaPredicted RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 DOPEY1Q5JWR5 2465 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 CFAP46Q8IYW2 2715 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 IGKV1D-43A0A0B4J1Z2 117 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 A0A1W2PPL8 197 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 CCDC182A6NF36 153 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 FAM183AA6NL82 134 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 FAM90A27PA6NNH2 459 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF878C9JN71 531 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 H7C1C5 153 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 DCTN6O00399 190 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ICMTO60725 284 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF254O75437 659 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 RAD51DO75771 328 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 LYZL6O75951 148 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 FADS2O95864 444 aaKnown RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 IGKV3-15P01624 115 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 HLA-DQA2P01906 255 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 RPSAP08865 295 aaKnown RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 OR2T7P0C7T2 308 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 DBTP11182 482 aaKnown RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 B4GALT1P15291 398 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 TUBG1P23258 451 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 GSTT1P30711 240 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 CCKARP32238 428 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 DCTDP32321 178 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 GABARAPL2P60520 117 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 RPS7P62081 194 aaKnown RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 LCN6P62502 163 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ACTA2P62736 377 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ACTG2P63267 376 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 HIST1H3AP68431 136 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ADAM8P78325 824 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ARF1P84077 181 aaKnown RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 PLP2Q04941 152 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF91Q05481 1191 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ECH1Q13011 328 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 MRPL28Q13084 256 aaKnown RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 APOFQ13790 326 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 RAB35Q15286 201 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 RBM48Q5RL73 367 aaKnown RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 PHYHD1Q5SRE7 291 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 HIST2H3PS2Q5TEC6 136 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 KCTD18Q6PI47 426 aaPredicted RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 HIST2H3AQ71DI3 136 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 CXorf67Q86X51 503 aaPredicted RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 TIGD4Q8IY51 512 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 GJC3Q8NFK1 279 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 OR9Q1Q8NGQ5 310 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 OR6K6Q8NGW6 343 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 OR2AJ1Q8NGZ0 328 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 OR2T27Q8NH04 317 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 OTOSQ8NHW6 89 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 RADILQ96JH8 1075 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 COG8Q96MW5 612 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 DACH2Q96NX9 599 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 ACTR6Q9GZN1 396 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 TUBG2Q9NRH3 451 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 DDX28Q9NUL7 540 aaKnown RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 CYB5R1Q9UHQ9 305 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 LRCH1Q9Y2L9 728 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 COA3Q9Y2R0 106 aaPredicted RBP5.87□□□□□ -1.47
UPF3B-205ENST00000636792 POLR1DQ9Y2S0 133 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 TPRKBQ9Y3C4 175 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 LRRC42Q9Y546 428 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 TIMM10BQ9Y5J6 103 aa5.87□□□□□ -1.47
UPF3B-205ENST00000636792 SPTBN1Q01082 2364 aaKnown RBP5.86□□□□□ -1.47
UPF3B-205ENST00000636792 IQCMA0A1B0GVH7 501 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 OR6C6A6NF89 314 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF670-ZNF695F2Z2N8 137 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 H3BSA7 217 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 SGCEO43556 437 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 WBP4O75554 376 aaKnown RBP5.86□□□□□ -1.47
UPF3B-205ENST00000636792 RAB36O95755 333 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 IGLV1-44P01699 117 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 IGHV3-9P01782 118 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 LYNP07948 512 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 MMP7P09237 267 aaPredicted RBP5.86□□□□□ -1.47
UPF3B-205ENST00000636792 SBK2P0C263 348 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 CBR1P16152 277 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 CRYGSP22914 178 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 EDNRAP25101 427 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 DCKP27707 260 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 OTX1P32242 354 aaPredicted RBP5.86□□□□□ -1.47
UPF3B-205ENST00000636792 ADMP35318 185 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 SLC15A1P46059 708 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 RGS6P49758 472 aa5.86□□□□□ -1.47
UPF3B-205ENST00000636792 GRB2P62993 217 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms