RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 LIPCP11150 499 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 HLA-DOBP13765 273 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 SRP14P37108 136 aaKnown RBP9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 SLC6A11P48066 632 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 AGFG1P52594 562 aaKnown RBP9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 RPS23P62266 143 aaKnown RBP9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 C6orf15Q6UXA7 325 aaPredicted RBP9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 SMIM4Q8WVI0 70 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 TMEM18Q96B42 140 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 AKR1E2Q96JD6 320 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 ZNF576Q9H609 170 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 ACER3Q9NUN7 267 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 CSAG2Q9Y5P2 127 aa9.05□□□□□ -0.96
SPTAN1-228ENST00000635853 GPRIN2O60269 458 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 APOA2P02652 100 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 GRPP07492 148 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 ZNF728P0DKX0 622 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 GABRA4P48169 554 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 ZNF626Q68DY1 528 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 KDF1Q8NAX2 398 aaPredicted RBP9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 OR1J1Q8NGS3 322 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 TEX101Q9BY14 249 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 BARHL1Q9BZE3 327 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 TRAV27A0A087WT01 109 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 YIF1AO95070 293 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 CXADRP78310 365 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 CALHM3Q86XJ0 350 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 FBLIM1Q8WUP2 373 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 MRPS24Q96EL2 167 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 WDR89Q96FK6 387 aaPredicted RBP9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 CMTM3Q96MX0 182 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 PAAF1Q9BRP4 392 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 ZNF281Q9Y2X9 895 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 USP3Q9Y6I4 520 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 WNK3Q9BYP7 1800 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 C7orf66A4D0T2 115 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 B4GALT3O60512 393 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 PAPLNO95428 1278 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 NMBP08949 121 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 PRSS56P0CW18 603 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 GGTA1PQ4G0N0 100 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 C11orf87Q6NUJ2 197 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 ABI3BPQ7Z7G0 1075 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 COMMD1Q8N668 190 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 SLC12A9Q9BXP2 914 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 PDLIM7Q9NR12 457 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 UBQLN4Q9NRR5 601 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 SCN11AQ9UI33 1791 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 ABHD16AO95870 558 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 FGF2P09038 288 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 EPXP11678 715 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 CSN1S1P47710 185 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 MTCP1P56278 107 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 CLDN6P56747 220 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 PCBP4P57723 403 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 TAS2R46P59540 309 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 NHLH2Q02577 135 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 IRF3Q14653 427 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 COX15Q7KZN9 410 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 FJX1Q86VR8 437 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 DEFB123Q8N688 67 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 ACOT4Q8N9L9 421 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 UBTD2Q8WUN7 234 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 TMPRSS13Q9BYE2 586 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 UQCC1Q9NVA1 299 aa9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 STRAPQ9Y3F4 350 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-228ENST00000635853 MSTNO14793 375 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 ATXN1LP0C7T5 689 aaKnown RBP9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 GALP22466 123 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 PLA1AQ53H76 456 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 NHLRC3Q5JS37 347 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 OR4C5Q8NGB2 326 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 ASB17Q8WXJ9 295 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 GHSRQ92847 366 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 RHOVQ96L33 236 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 MCOLN1Q9GZU1 580 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 PLAC1Q9HBJ0 212 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 SCN4AP35499 1836 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 C20orf202A1L168 122 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 M0R1B8 84 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 SOCS6O14544 535 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 OR7C1O76099 320 aaPredicted RBP9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 GLCEO94923 617 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 F11P03951 625 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 ADH4P08319 380 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 SELEP16581 610 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 MAKP20794 623 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 GPR18Q14330 331 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 HNF4GQ14541 408 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 WFDC8Q8IUA0 241 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 OR51S1Q8NGJ8 323 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 OR1S2Q8NGQ3 325 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 C16orf70Q9BSU1 422 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 SLCO5A1Q9H2Y9 848 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 TMEM38AQ9H6F2 299 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 ANKRD10Q9NXR5 420 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 MTCH1Q9NZJ7 389 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 POMT1Q9Y6A1 747 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 URGCP-MRPS24S4R325 110 aa9.03□□□□□ -0.96
SPTAN1-228ENST00000635853 A0A1B0GUL6 1792 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms