RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 CLEC1AQ8NC01 280 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 C4orf45Q96LM5 186 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 LPAR4Q99677 370 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 KXD1Q9BQD3 176 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ZNF471Q9BX82 626 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 CHST6Q9GZX3 395 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ATG5Q9H1Y0 275 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 RPH3AQ9Y2J0 694 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 LOC100289279A0A1B0GTE1 492 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TMEM272A0A1B0GTI8 110 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 CLDN4O14493 209 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 HCRTR1O43613 425 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 WNT11O96014 354 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 F12P00748 615 aaPredicted RBP7.85□□□□□ -1.15
VCL-207ENST00000624354 ASAH2BP0C7U1 165 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 HOXB2P14652 356 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TNFRSF4P43489 277 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 GPR3P46089 330 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 RPL18Q07020 188 aaKnown RBP7.85□□□□□ -1.15
VCL-207ENST00000624354 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.85□□□□□ -1.15
VCL-207ENST00000624354 KLHL26Q53HC5 615 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 MESTQ5EB52 335 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 PRSS35Q8N3Z0 413 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 WDR77Q9BQA1 342 aaPredicted RBP7.85□□□□□ -1.15
VCL-207ENST00000624354 OR10A5Q9H207 317 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 SYT4Q9H2B2 425 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 SLC17A5Q9NRA2 495 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 PRTFDC1Q9NRG1 225 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 UFSP2Q9NUQ7 469 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 GTF2A1LQ9UNN4 478 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 PLEKHA6Q9Y2H5 1048 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 CARHSP1Q9Y2V2 147 aaKnown RBP7.85□□□□□ -1.15
VCL-207ENST00000624354 TGFBR3LH3BV60 316 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 SLC17A2O00624 439 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 ICOSLGO75144 302 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 SLC25A12O75746 678 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 RAB3DO95716 219 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 HEXAP06865 529 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 OR4E1P0C645 316 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 RNF224P0DH78 156 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 HNRNPA2B1P22626 353 aaKnown RBP7.85□□□□□ -1.15
VCL-207ENST00000624354 TAS2R19P59542 299 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 SKP1P63208 163 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 DEFA6Q01524 100 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 KCNAB1Q14722 419 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 ALG11Q2TAA5 492 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 OR2B11Q5JQS5 317 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 WDR38Q5JTN6 314 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 ACER2Q5QJU3 275 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 C3orf33Q6P1S2 294 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 GABRG1Q8N1C3 465 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 BEST3Q8N1M1 668 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 ZDHHC12Q96GR4 267 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TMEM41AQ96HV5 264 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 CNTNAP3BQ96NU0 1288 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TSPAN32Q96QS1 320 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TLNRD1Q9H1K6 362 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 POFUT1Q9H488 388 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 FAM60AQ9NP50 221 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 BDP1A6H8Y1 2624 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 GPR179Q6PRD1 2367 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 HLA-DQA2P01906 255 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 ITGB2P05107 769 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 RD3LP0DJH9 198 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 CFPP27918 469 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 KIR3DL2P43630 455 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 PPP1CAP62136 330 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 ERV3-1Q14264 604 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 C9orf152Q5JTZ5 239 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 EEF1A1P5Q5VTE0 462 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 ARMC6Q6NXE6 501 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TMEM71Q6P5X7 295 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TMEM205Q6UW68 189 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TMED4Q7Z7H5 227 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 GPX8Q8TED1 209 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 ZC3H10Q96K80 434 aaKnown RBP7.85□□□□□ -1.15
VCL-207ENST00000624354 SLC25A21Q9BQT8 299 aaPredicted RBP7.85□□□□□ -1.15
VCL-207ENST00000624354 MTIF3Q9H2K0 278 aaKnown RBP7.85□□□□□ -1.15
VCL-207ENST00000624354 FBRSQ9HAH7 460 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 TREM1Q9NP99 234 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 UBQLN4Q9NRR5 601 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 LHX6Q9UPM6 363 aa7.85□□□□□ -1.15
VCL-207ENST00000624354 RTTNQ86VV8 2226 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 CTSBP07858 339 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 MELTFP08582 738 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 FOLR2P14207 255 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 NFYBP25208 207 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 FABP9Q0Z7S8 132 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 CCINQ13939 588 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 CD226Q15762 336 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 LIN54Q6MZP7 749 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 CBLN3Q6UW01 205 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 LRRC69Q6ZNQ3 347 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 ZNF761Q86XN6 746 aaPredicted RBP7.84□□□□□ -1.15
VCL-207ENST00000624354 MISPQ8IVT2 679 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 OTOSQ8NHW6 89 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 ZNF563Q8TA94 476 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 ZNF75AQ96N20 296 aa7.84□□□□□ -1.15
VCL-207ENST00000624354 RBM14Q96PK6 669 aaKnown RBP7.84□□□□□ -1.15
VCL-207ENST00000624354 GABRG3Q99928 467 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms