RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 IPCEF1Q8WWN9 437 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-229ENST00000621747 RERGLQ9H628 205 aa21.51■■□□□ 1.03
VEGFA-229ENST00000621747 PLSCR5A0PG75 271 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 SGCEO43556 437 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 RP2O75695 350 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 TXNDC12O95881 172 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 IFNGR2P38484 337 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 MPV17P39210 176 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 HTR5AP47898 357 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 MNAT1P51948 309 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 FXYD6P3P58550 94 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 AQP6Q13520 282 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 CR1LQ2VPA4 569 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 IL17RELQ6ZVW7 336 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 CLDND2Q8NHS1 167 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 FANK1Q8TC84 345 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 SAP30LQ9HAJ7 183 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 CYSLTR2Q9NS75 346 aa21.5■■□□□ 1.03
VEGFA-229ENST00000621747 CGGBP1Q9UFW8 167 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-229ENST00000621747 CDC14BO60729 498 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 ABHD16AO95870 558 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 TFP02787 698 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 LIPAP38571 399 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 CRYBB2P43320 205 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 LSM6P62312 80 aaKnown RBP21.49■■□□□ 1.03
VEGFA-229ENST00000621747 FAM209AQ5JX71 171 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 DNM1P34Q6PK57 102 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 ZER1Q7Z7L7 766 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 GTF3AQ92664 365 aaKnown RBP21.49■■□□□ 1.03
VEGFA-229ENST00000621747 GPA33Q99795 319 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 RACGAP1Q9H0H5 632 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 NARFLQ9H6Q4 476 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 IL1RAPQ9NPH3 570 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 TMCC3Q9ULS5 477 aa21.49■■□□□ 1.03
VEGFA-229ENST00000621747 COA3Q9Y2R0 106 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-229ENST00000621747 IGHV1-69-2A0A0G2JMI3 117 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 RNF212BA8MTL3 300 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 B4DSR2 109 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 OR10H3O60404 316 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 NGFP01138 241 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 PCMT1P22061 227 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 SLC6A6P31641 620 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 THBS2P35442 1172 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 MMP15P51511 669 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 TSTQ16762 297 aaKnown RBP21.48■■□□□ 1.03
VEGFA-229ENST00000621747 RFX4Q33E94 735 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 PTCHD4Q6ZW05 846 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 NPEPL1Q8NDH3 523 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 SPATA3Q8NHX4 192 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 ERMAPQ96PL5 475 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-229ENST00000621747 NUAK2Q9H093 628 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 TBCCD1Q9NVR7 557 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 PLEK2Q9NYT0 353 aa21.48■■□□□ 1.03
VEGFA-229ENST00000621747 MALRD1Q5VYJ5 2156 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 DNHD1Q96M86 4753 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 IMPA2O14732 288 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 SPRY3O43610 288 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 PPP1R3DO95685 299 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 GSTM3P21266 225 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 TUBG1P23258 451 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 FPR3P25089 353 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 CRABP1P29762 137 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 RRM2P31350 389 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 CDKN2AP42771 156 aaKnown RBP21.47■■□□□ 1.03
VEGFA-229ENST00000621747 DVL1P1P54792 670 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-229ENST00000621747 ZMAT1Q5H9K5 638 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 USP51Q70EK9 711 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 VASH1Q7L8A9 365 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-229ENST00000621747 ZDHHC21Q8IVQ6 265 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 TMEM158Q8WZ71 300 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 ELMOD3Q96FG2 381 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 OR52D1Q9H346 318 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 TUBG2Q9NRH3 451 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 ASH2LQ9UBL3 628 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 TMEFF2Q9UIK5 374 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-229ENST00000621747 SVEP1Q4LDE5 3571 aa21.47■■□□□ 1.03
VEGFA-229ENST00000621747 IGHV1-46P01743 117 aa21.46■■□□□ 1.03
VEGFA-229ENST00000621747 HFEQ30201 348 aa21.46■■□□□ 1.03
VEGFA-229ENST00000621747 PGM2L1Q6PCE3 622 aa21.46■■□□□ 1.03
VEGFA-229ENST00000621747 JAZF1Q86VZ6 243 aa21.46■■□□□ 1.03
VEGFA-229ENST00000621747 EGLN1Q9GZT9 426 aa21.46■■□□□ 1.03
VEGFA-229ENST00000621747 POLR1DQ9Y2S0 133 aa21.46■■□□□ 1.03
VEGFA-229ENST00000621747 FBN1P35555 2871 aaKnown RBP21.45■■□□□ 1.02
VEGFA-229ENST00000621747 CLDN25C9JDP6 229 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 PHF1O43189 567 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-229ENST00000621747 MPZL1O95297 269 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 CENPAP49450 140 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 TMEM255AQ5JRV8 349 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 GLCCI1Q86VQ1 547 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 GNPDA2Q8TDQ7 276 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 COG8Q96MW5 612 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 DIRC2Q96SL1 478 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 TREM2Q9NZC2 230 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 ZDHHC8Q9ULC8 765 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 GRIP1Q9Y3R0 1128 aa21.45■■□□□ 1.02
VEGFA-229ENST00000621747 ZSCAN5BA6NJL1 495 aa21.44■■□□□ 1.02
VEGFA-229ENST00000621747 WNT9BO14905 357 aa21.44■■□□□ 1.02
VEGFA-229ENST00000621747 ARPC3O15145 178 aa21.44■■□□□ 1.02
VEGFA-229ENST00000621747 TIMM8AO60220 97 aaPredicted RBP21.44■■□□□ 1.02
VEGFA-229ENST00000621747 KRT36O76013 467 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms