RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 XRCC3O43542 346 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 F11P03951 625 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 HRH1P35367 487 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 SSBP1Q04837 148 aaKnown RBP17.22■□□□□ 0.35
SPAST-203ENST00000615843 LRRTM1Q86UE6 522 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 BSCL2Q96G97 398 aaPredicted RBP17.22■□□□□ 0.35
SPAST-203ENST00000615843 ZDHHC5Q9C0B5 715 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 A0A087WV62 115 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 ZNF727A8MUV8 499 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 E5RGE8 158 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 MAN2B1O00754 1011 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 WNT1P04628 370 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 SFTA3P0C7M3 94 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 GCH1P30793 250 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 PGFP49763 221 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 OR5AP2Q8NGF4 316 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 AKR1E2Q96JD6 320 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 NSG2Q9Y328 171 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 RNASEK-C17orf49H0YIS7 233 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 TMEM127O75204 238 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 TBPP20226 339 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 POU3F2P20265 443 aaPredicted RBP17.22■□□□□ 0.35
SPAST-203ENST00000615843 SNRPEP62304 92 aaKnown RBP17.22■□□□□ 0.35
SPAST-203ENST00000615843 PHYHD1Q5SRE7 291 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 OR1J1Q8NGS3 322 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 HMGCLL1Q8TB92 370 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 PRAMEF4O60810 478 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 PTGER4P35408 488 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 DBX2Q6ZNG2 339 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 ZFP62Q8NB50 900 aaPredicted RBP17.21■□□□□ 0.35
SPAST-203ENST00000615843 ZNF845Q96IR2 970 aaPredicted RBP17.21■□□□□ 0.35
SPAST-203ENST00000615843 C8orf33Q9H7E9 229 aaPredicted RBP17.21■□□□□ 0.35
SPAST-203ENST00000615843 SDCBPO00560 298 aaPredicted RBP17.21■□□□□ 0.35
SPAST-203ENST00000615843 MPPED1O15442 326 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 GLI4P10075 376 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 RAB13P51153 203 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 RPS15P62841 145 aaKnown RBP17.21■□□□□ 0.35
SPAST-203ENST00000615843 NECAP1Q8NC96 275 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 LYSMD1Q96S90 227 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 TMEM30AQ9NV96 361 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 H3BQ06 376 aaPredicted RBP17.21■□□□□ 0.35
SPAST-203ENST00000615843 NDUFB6O95139 128 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 OR8G2PQ6IF36 304 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 C17orf99Q6UX52 265 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 EMG1Q92979 244 aaKnown RBP17.21■□□□□ 0.35
SPAST-203ENST00000615843 KIRREL1Q96J84 757 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 IL23AQ9NPF7 189 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 MCTS1Q9ULC4 181 aaKnown RBP17.21■□□□□ 0.35
SPAST-203ENST00000615843 PIGLQ9Y2B2 252 aa17.21■□□□□ 0.35
SPAST-203ENST00000615843 HSD17B6O14756 317 aa17.21■□□□□ 0.34
SPAST-203ENST00000615843 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 C1QAP02745 245 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 EGR3Q06889 387 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 EMC4Q5J8M3 183 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 ZNF775Q96BV0 537 aaPredicted RBP17.2■□□□□ 0.34
SPAST-203ENST00000615843 PCDHB10Q9UN67 800 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 FLVCR1Q9Y5Y0 555 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 GRB2P62993 217 aaKnown RBP17.2■□□□□ 0.34
SPAST-203ENST00000615843 LCN15Q6UWW0 184 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 TMEM18Q96B42 140 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 LYRM4Q9HD34 91 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 A0A1B0GUL6 1792 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 ZNF217O75362 1048 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 C17orf67Q0P5P2 114 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 GSG1Q2KHT4 349 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 SMUG1Q53HV7 270 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 DOK3Q7L591 496 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 OR2W3Q7Z3T1 314 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 MARCH3Q86UD3 253 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 RXFP4Q8TDU9 374 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 RYDENQ9NUL5 291 aaKnown RBP17.2■□□□□ 0.34
SPAST-203ENST00000615843 CCL26Q9Y258 94 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 RPA2P15927 270 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 GPR85P60893 370 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 SLC35A1P78382 337 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 JAM3Q9BX67 310 aa17.2■□□□□ 0.34
SPAST-203ENST00000615843 F10P00742 488 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 ATF1P18846 271 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 METRNLQ641Q3 311 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 DUSP18Q8NEJ0 188 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 DAPP1Q9UN19 280 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 CNTRLQ7Z7A1 2325 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 URB1O60287 2271 aaKnown RBP17.19■□□□□ 0.34
SPAST-203ENST00000615843 CLN5O75503 358 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 BSGP35613 385 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 HOXA1P49639 335 aaPredicted RBP17.19■□□□□ 0.34
SPAST-203ENST00000615843 MEOX2P50222 304 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 GUCA2AQ02747 115 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 OR51A2Q8NGJ7 313 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 STT3BQ8TCJ2 826 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 TSLPQ969D9 159 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 VPS25Q9BRG1 176 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 CRLF2Q9HC73 371 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 PLGLAQ15195 96 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 ARSGQ96EG1 525 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 CMTM3Q96MX0 182 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 SUCNR1Q9BXA5 334 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 CYB5R1Q9UHQ9 305 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 RPH3ALQ9UNE2 315 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms