RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 TMED7-TICAM2A0A0A6YYA0 188 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 IGKV1D-43A0A0B4J1Z2 117 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 OR5H14A6NHG9 310 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 OR5K4A6NMS3 321 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 H3BUI4 141 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 ZNF823P16415 610 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 CD34P28906 385 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 HSD17B7P56937 341 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 DHRS2Q13268 280 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 TMEM88Q6PEY1 159 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 MAMDC2Q7Z304 686 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-207ENST00000612273 WDFY1Q8IWB7 410 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 DPYSL5Q9BPU6 564 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 MFRPQ9BY79 579 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 SLC19A3Q9BZV2 496 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 DZANK1Q9NVP4 752 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 COMMD9Q9P000 198 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 KIF25Q9UIL4 384 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 IL33O95760 270 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 PPICP45877 212 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 ATP1B3P54709 279 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 RPL27P61353 136 aaKnown RBP12.62□□□□□ -0.39
COL6A1-207ENST00000612273 POU3F1Q03052 451 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-207ENST00000612273 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL6A1-207ENST00000612273 ATPAF1Q5TC12 328 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-207ENST00000612273 CARD17Q5XLA6 110 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 ZNF584Q8IVC4 421 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 FOXRED2Q8IWF2 684 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 ZNF440Q8IYI8 595 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 OR13C9Q8NGT0 318 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 CMTM3Q96MX0 182 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 FOXQ1Q9C009 403 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 PTGES2Q9H7Z7 377 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 CUTCQ9NTM9 273 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 TAS2R8Q9NYW2 309 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 CLEC1BQ9P126 229 aa12.62□□□□□ -0.39
COL6A1-207ENST00000612273 GNB3P16520 340 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 ZP3P21754 424 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 PMPCAQ10713 525 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 COX15Q7KZN9 410 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 ARHGEF39Q8N4T4 335 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 TMEM185AQ8NFB2 350 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 NPRL2Q8WTW4 380 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 PPP1R1CQ8WVI7 109 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 HOXB13Q92826 284 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-207ENST00000612273 POTEKPQ9BYX7 375 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 EPHA6Q9UF33 1036 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 TRAV14DV4A0A0A6YYC5 116 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 F5H0A9 414 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-207ENST00000612273 LDOC1O95751 146 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-207ENST00000612273 HOXC4P09017 264 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-207ENST00000612273 POU2F2P09086 479 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 C9orf40Q8IXQ3 194 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 TCTN2Q96GX1 697 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 VRK1Q99986 396 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-207ENST00000612273 SELENOIQ9C0D9 397 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 EVA1AQ9H8M9 152 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 KLK13Q9UKR3 277 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 PLCL2Q9UPR0 1127 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 POLR1DQ9Y2S0 133 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 CAPZBP47756 277 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 FBXW4P57775 412 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 EGR3Q06889 387 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 RSPO4Q2I0M5 234 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-207ENST00000612273 LY6G6FQ5SQ64 297 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 C1orf140Q5VVS0 124 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 KCTD18Q6PI47 426 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-207ENST00000612273 CDH26Q8IXH8 852 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 ZNF101Q8IZC7 436 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 ARMC10Q8N2F6 343 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 SLC43A2Q8N370 569 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 BVESQ8NE79 360 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 OR5D18Q8NGL1 313 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 ZBTB8AQ96BR9 441 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 SOX7Q9BT81 388 aa12.61□□□□□ -0.39
COL6A1-207ENST00000612273 TRAV36DV7A0A075B6V5 113 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 METTL12A8MUP2 240 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 AHSA1O95433 338 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 CD1AP06126 327 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 CSF2RBP32927 897 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 OR1D5P58170 312 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 TAS2R19P59542 299 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 AKIRIN2Q53H80 203 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 RNASE10Q5GAN6 216 aaKnown RBP12.6□□□□□ -0.39
COL6A1-207ENST00000612273 FNDC7Q5VTL7 733 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 FAM69BQ5VUD6 431 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 TRAPPC6BQ86SZ2 158 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 SLC51BQ86UW2 128 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 FAM131CQ96AQ9 280 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 CST11Q9H112 138 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 FAM74A7A6NL05 159 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 PMP2P02689 132 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 BGLAPP02818 100 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 ABCD3P28288 659 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 ACTBP60709 375 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 ACTG1P63261 375 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 IL13RA1P78552 427 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 GLO1Q04760 184 aa12.6□□□□□ -0.39
COL6A1-207ENST00000612273 BAMBIQ13145 260 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms