RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 PAICSP22234 425 aaKnown RBP16.68■□□□□ 0.26
UPF1-212ENST00000601689 FASP25445 335 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 HTR5AP47898 357 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 BLVRAP53004 296 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 KLF3P57682 345 aaPredicted RBP16.68■□□□□ 0.26
UPF1-212ENST00000601689 KCNMB1Q16558 191 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 NKPD1Q17RQ9 610 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 ZNF718Q3SXZ3 478 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 ZNF774Q6NX45 483 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 ZBTB46Q86UZ6 589 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 OR6V1Q8N148 313 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 PROKR2Q8NFJ6 384 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 IPCEF1Q8WWN9 437 aaPredicted RBP16.68■□□□□ 0.26
UPF1-212ENST00000601689 FAM168AQ92567 244 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 POM121L2Q96KW2 1035 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 TSSK2Q96PF2 358 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 DOK1Q99704 481 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 NIPSNAP1Q9BPW8 284 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 WNT5BQ9H1J7 359 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 ASH2LQ9UBL3 628 aa16.68■□□□□ 0.26
UPF1-212ENST00000601689 MAP1AP78559 2803 aaPredicted RBP16.68■□□□□ 0.26
UPF1-212ENST00000601689 NDUFS7O75251 213 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 ABHD16AO95870 558 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 TUBG1P23258 451 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 POU1F1P28069 291 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 PDLIM4P50479 330 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 TEKQ02763 1124 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 TNK1Q13470 666 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 SLC27A4Q6P1M0 643 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 SHQ1Q6PI26 577 aaKnown RBP16.67■□□□□ 0.26
UPF1-212ENST00000601689 UGT2A3Q6UWM9 527 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.67■□□□□ 0.26
UPF1-212ENST00000601689 NPEPL1Q8NDH3 523 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 C4orf45Q96LM5 186 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 SYT3Q9BQG1 590 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 MRPL37Q9BZE1 423 aaKnown RBP16.67■□□□□ 0.26
UPF1-212ENST00000601689 TUBG2Q9NRH3 451 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 REV1Q9UBZ9 1251 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 KCNG2Q9UJ96 466 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 AP4S1Q9Y587 144 aa16.67■□□□□ 0.26
UPF1-212ENST00000601689 VPS13CQ709C8 3753 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 RTTNQ86VV8 2226 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 OR6C68A6NDL8 312 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 OR6C6A6NF89 314 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 TRIM64A6NGJ6 449 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 TRIM64BA6NI03 449 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 SMAD7O15105 426 aaKnown RBP16.66■□□□□ 0.26
UPF1-212ENST00000601689 TIPRLO75663 272 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 HMGN1P05114 100 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 HIPK1Q86Z02 1210 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 ZNF540Q8NDQ6 660 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 OR5K1Q8NHB7 308 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 PLEKHA8Q96JA3 519 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 PLA2G12AQ9BZM1 189 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 HDHD2Q9H0R4 259 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 ARMC1Q9NVT9 282 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 ATPIF1Q9UII2 106 aa16.66■□□□□ 0.26
UPF1-212ENST00000601689 IGLV1-36A0A0B4J1U3 117 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 H3BSA7 217 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 NDUFS8O00217 210 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 MPZL1O95297 269 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 ADRA2AP08913 450 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 OSMP13725 252 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 ZNF250P15622 560 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 SLC25A16P16260 332 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 FMO3P31513 532 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 GRK5P34947 590 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 LIPAP38571 399 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 RGS6P49758 472 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 ZDHHC13Q8IUH4 622 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 PAQR4Q8N4S7 273 aaPredicted RBP16.65■□□□□ 0.26
UPF1-212ENST00000601689 SLC37A3Q8NCC5 494 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 OR5L1Q8NGL2 311 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 OR8D4Q8NGM9 314 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 OR1F12Q8NHA8 337 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 ABHD4Q8TB40 342 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 OTULINQ96BN8 352 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 COX4I2Q96KJ9 171 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 SORCS2Q96PQ0 1159 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 DCLRE1CQ96SD1 692 aaKnown RBP16.65■□□□□ 0.26
UPF1-212ENST00000601689 PRRG3Q9BZD7 231 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 TBCCD1Q9NVR7 557 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 TAAR3PQ9P1P4 343 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 ENOPH1Q9UHY7 261 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 FZR1Q9UM11 496 aa16.65■□□□□ 0.26
UPF1-212ENST00000601689 HIVEP1P15822 2718 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 LOC100509620A0A075B734 347 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 LOC390937A0A1W2PQ73 354 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 TMEM129A0AVI4 362 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 PLSCR5A0PG75 271 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 G3V2T6 193 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 DCTN6O00399 190 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 SCG5P05408 212 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 ECH1Q13011 328 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 CARTPTQ16568 116 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 ELFN2Q5R3F8 820 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 TMEM154Q6P9G4 183 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 VASH1Q7L8A9 365 aaPredicted RBP16.64■□□□□ 0.25
UPF1-212ENST00000601689 CYB561A3Q8NBI2 242 aa16.64■□□□□ 0.25
UPF1-212ENST00000601689 SLC26A10Q8NG04 563 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms