RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 NSRP1Q9H0G5 558 aaKnown RBP13.45□□□□□ -0.26
VRK3-221ENST00000600284 NARFLQ9H6Q4 476 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 TREM2Q9NZC2 230 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 ADA2Q9NZK5 511 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 VSX1Q9NZR4 365 aaPredicted RBP13.45□□□□□ -0.26
VRK3-221ENST00000600284 AURKCQ9UQB9 309 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 GRIP1Q9Y3R0 1128 aa13.45□□□□□ -0.26
VRK3-221ENST00000600284 STAB1Q9NY15 2570 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 CLDN25C9JDP6 229 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 SGCEO43556 437 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 TXNDC12O95881 172 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 NGFP01138 241 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 IGHV1-46P01743 117 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 SMIM11AP58511 58 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 GLO1Q04760 184 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 SLC3A1Q07837 685 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 AQP6Q13520 282 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 TSTQ16762 297 aaKnown RBP13.44□□□□□ -0.26
VRK3-221ENST00000600284 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 DPY19L2P2Q6ZN68 376 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 RFPL4BQ6ZWI9 263 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 ADCK1Q86TW2 530 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 TEX29Q8N6K0 151 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 NPEPL1Q8NDH3 523 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 RAB1CQ92928 201 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 RAB39BQ96DA2 213 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 TIMD4Q96H15 378 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 COG8Q96MW5 612 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 ZNF665Q9H7R5 613 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 HIF1ANQ9NWT6 349 aa13.44□□□□□ -0.26
VRK3-221ENST00000600284 TRAV20A0A0B4J274 112 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 TRBV4-1A0A0J9YWV2 114 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 SPRY3O43610 288 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 TCF21O43680 179 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 KHDRBS3O75525 346 aaKnown RBP13.43□□□□□ -0.26
VRK3-221ENST00000600284 ABHD16AO95870 558 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 CD55P08174 381 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 HSD17B1P14061 328 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 CTLA4P16410 223 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 GSTM3P21266 225 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 RPS6KA3P51812 740 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 SCGB2A2Q13296 93 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 KRR1Q13601 381 aaKnown RBP13.43□□□□□ -0.26
VRK3-221ENST00000600284 MTX3Q5HYI7 312 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 TMEM255AQ5JRV8 349 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 ACSM5Q6NUN0 579 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 CPLX4Q7Z7G2 160 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 GLB1L2Q8IW92 636 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 GTF3AQ92664 365 aaKnown RBP13.43□□□□□ -0.26
VRK3-221ENST00000600284 PYURFQ96I23 114 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 RSRC1Q96IZ7 334 aaKnown RBP13.43□□□□□ -0.26
VRK3-221ENST00000600284 FUZQ9BT04 418 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 EMC7Q9NPA0 242 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 MAGEL2Q9UJ55 1249 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 METRNQ9UJH8 293 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 WIPI2Q9Y4P8 454 aa13.43□□□□□ -0.26
VRK3-221ENST00000600284 UNC119BA6NIH7 251 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 J3QW42 95 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 IMPA2O14732 288 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 DOK2O60496 412 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 SLC16A7O60669 478 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 UBOX5O94941 541 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 HTR5AP47898 357 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 MVKQ03426 396 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 SEC23BQ15437 767 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 KCNMB1Q16558 191 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 PGM2L1Q6PCE3 622 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 SMARCD3Q6STE5 483 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 THSD4Q6ZMP0 1018 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 VASH1Q7L8A9 365 aaPredicted RBP13.42□□□□□ -0.26
VRK3-221ENST00000600284 CCL17Q92583 94 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 RASD2Q96D21 266 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 LRRC37BQ96QE4 947 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 C19orf24Q9BVV8 132 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 FAM107BQ9H098 131 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 SYT4Q9H2B2 425 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 PLEK2Q9NYT0 353 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 ATPIF1Q9UII2 106 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 COA3Q9Y2R0 106 aaPredicted RBP13.42□□□□□ -0.26
VRK3-221ENST00000600284 IER3IP1Q9Y5U9 82 aa13.42□□□□□ -0.26
VRK3-221ENST00000600284 A0A0A6YYJ9 748 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 ZSCAN5BA6NJL1 495 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 DEAF1O75398 565 aaPredicted RBP13.41□□□□□ -0.26
VRK3-221ENST00000600284 SEMG1P04279 462 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 KITLGP21583 273 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 CRABP1P29762 137 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 FXYD6P3P58550 94 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 PSG7Q13046 419 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 CDK5R2Q13319 367 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 SPATS1Q496A3 300 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 SAMD4BQ5PRF9 694 aaKnown RBP13.41□□□□□ -0.26
VRK3-221ENST00000600284 AVPI1Q5T686 147 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 DNM1P34Q6PK57 102 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 RINLQ6ZS11 566 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 PEG10Q86TG7 708 aaKnown RBP13.41□□□□□ -0.26
VRK3-221ENST00000600284 PGAM4Q8N0Y7 254 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 RNF148Q8N7C7 305 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 FAM86B1Q8N7N1 296 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 OR52J3Q8NH60 311 aa13.41□□□□□ -0.26
VRK3-221ENST00000600284 DCLRE1CQ96SD1 692 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms