RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 ZNF730Q6ZMV8 503 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 Q6ZR03 302 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 SPATA24Q86W54 205 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 DHFR2Q86XF0 187 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 ICA1LQ8NDH6 482 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 ZNF540Q8NDQ6 660 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 KLF14Q8TD94 323 aaPredicted RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 HPS1Q92902 700 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 ASB9Q96DX5 294 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 TSSK2Q96PF2 358 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 NRIP3Q9NQ35 241 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 DCAF13Q9NV06 445 aaKnown RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 FBXL3Q9UKT7 428 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 TEX13CA0A0J9YWL9 993 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 IQCMA0A1B0GVH7 501 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 A0A1W2PPL8 197 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 A0A1W2PRQ8 180 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 VGLL3A8MV65 326 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 GSTA4O15217 222 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 PPIHO43447 177 aaKnown RBP8.89□□□□□ -0.99
LIG1-213ENST00000596672 BAG2O95816 211 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 DBHP09172 617 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 GAAP10253 952 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 THBS2P35442 1172 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 CRYBB2P43320 205 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 TMEM33P57088 247 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 RPS23P62266 143 aaKnown RBP8.89□□□□□ -0.99
LIG1-213ENST00000596672 MRPS11P82912 194 aaKnown RBP8.89□□□□□ -0.99
LIG1-213ENST00000596672 MVKQ03426 396 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 HSF2Q03933 536 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 PSG7Q13046 419 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 DGCR6Q14129 220 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 RCN1Q15293 331 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 TAF11Q15544 211 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 NKPD1Q17RQ9 610 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 SPATS1Q496A3 300 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 CCDC92Q53HC0 331 aaPredicted RBP8.89□□□□□ -0.99
LIG1-213ENST00000596672 GLYATQ6IB77 296 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 USP51Q70EK9 711 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 FKBP9P1Q75LS8 142 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 DPPA2Q7Z7J5 298 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 ZER1Q7Z7L7 766 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 RNF113BQ8IZP6 322 aaKnown RBP8.89□□□□□ -0.99
LIG1-213ENST00000596672 OR52J3Q8NH60 311 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 ZNRF4Q8WWF5 429 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 PYDC1Q8WXC3 89 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 C11orf40Q8WZ69 217 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 FAM162AQ96A26 154 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 RSRC1Q96IZ7 334 aaKnown RBP8.89□□□□□ -0.99
LIG1-213ENST00000596672 LRGUKQ96M69 825 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 RBP7Q96R05 134 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 BCL2L14Q9BZR8 327 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 MSL2Q9HCI7 577 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 S100A14Q9HCY8 104 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 G6PC2Q9NQR9 355 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 NKIRAS2Q9NYR9 191 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 LPAR3Q9UBY5 353 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 TMEFF2Q9UIK5 374 aaPredicted RBP8.89□□□□□ -0.99
LIG1-213ENST00000596672 FBXO9Q9UK97 447 aaPredicted RBP8.89□□□□□ -0.99
LIG1-213ENST00000596672 AP3M1Q9Y2T2 418 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 STARD10Q9Y365 291 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 V9GYQ6 96 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 TRRAPQ9Y4A5 3859 aa8.89□□□□□ -0.99
LIG1-213ENST00000596672 PRSS37A4D1T9 235 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 ARPC2O15144 300 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 SPRY3O43610 288 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 FKBP6O75344 327 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 IFNA2P01563 188 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 H1F0P07305 194 aaKnown RBP8.88□□□□□ -0.99
LIG1-213ENST00000596672 PSKH1P11801 424 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 ATP6V1B2P21281 511 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 MSR1P21757 451 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 APLNRP35414 380 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 RAD52P43351 418 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 DVL1P1P54792 670 aaPredicted RBP8.88□□□□□ -0.99
LIG1-213ENST00000596672 PPP1CBP62140 327 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 PLP2Q04941 152 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 MEP1BQ16820 701 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 MBNL2Q5VZF2 373 aaKnown RBP8.88□□□□□ -0.99
LIG1-213ENST00000596672 VASH1Q7L8A9 365 aaPredicted RBP8.88□□□□□ -0.99
LIG1-213ENST00000596672 OR1J2Q8NGS2 313 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 ABHD4Q8TB40 342 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 LZICQ8WZA0 190 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 GPX7Q96SL4 187 aaPredicted RBP8.88□□□□□ -0.99
LIG1-213ENST00000596672 DDOQ99489 341 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 C19orf24Q9BVV8 132 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 NUAK2Q9H093 628 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 SYT4Q9H2B2 425 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 C1orf198Q9H425 327 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 DCLRE1BQ9H816 532 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 RNPEPL1Q9HAU8 725 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 CCNB1IP1Q9NPC3 277 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 VSX1Q9NZR4 365 aaPredicted RBP8.88□□□□□ -0.99
LIG1-213ENST00000596672 COA3Q9Y2R0 106 aaPredicted RBP8.88□□□□□ -0.99
LIG1-213ENST00000596672 WIPI2Q9Y4P8 454 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 TIMM10BQ9Y5J6 103 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 IER3IP1Q9Y5U9 82 aa8.88□□□□□ -0.99
LIG1-213ENST00000596672 IGLV1-36A0A0B4J1U3 117 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 IGHV1-69-2A0A0G2JMI3 117 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 HTR3EA5X5Y0 456 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms